Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1516 |
Symbol | |
ID | 4021996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1691569 |
End bp | 1692444 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637961711 |
Product | inner-membrane translocator |
Protein accession | YP_568654 |
Protein GI | 91975995 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.713706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCTCGC AGATCCTGCA ATTCATGTTT TCCGGCGTCA CGGTAGGCGC GACCTATGCG CTGGCGGCGC TCGGCTTCAC GCTGATCTAC AACGCCAGCA ACGTGATCAA CTTCGCGCAG GGCGAGTTCA TCATGCTCGG CGGCATCCTC ACCGTGTTCT TCTTCAAGAC CGGCCTGCCG CTTCCGGTCG CGCTGTTGCT GGCGGTGGCA ATTCCGGCGA TGGTCGGCGT CCTGGTCGAG AAACTCGCGA TCGAGCCGGC CAAGGGCGCC GGCGTCGAGA GCCTGATCAT CATCACCATC GGCGCATCGT TGGTGCTGCG CGGTCTGGTG CAGATCTCGT TCGGCAAGGG CGCCGCTTCC TTCCCGGCGT TTTCCGGCGA CGCGCCGATC AACATCGGCG GCGCTGCGCT GGCGCCGCAG AGCCTGTGGG TGCTCGGAAC CACGGCGGTG GTCGTGCTGG CGCTGTGGCT GTTCTTCAAC AGGACCGTCG CCGGCAAGGC CATTCTGGCG ACGTCCTACG ATCCGCTCGC CGCGCAGTTG GTCGGGGTCA ATACCCAGCT GGTGCTGCTG GTCAGTTTCG CGCTGTCGGC GGCGATCGGC GCGATGGGCG GGATTCTGCT GACGCCGATC ACGATGACCT CCTACGATGT CGGGATCATG CTCGGCCTCA AGGGTTTCGT GGCGGCGGTG GTCGGCGGTC TCGGCTCCGG GCTCGGCGCT GTGGTCGGCG GATTGCTGGT CGGAATCGTC GAAGCGTTGA CCGCCGGCTA CGTCTCCTCG GCCTACAAGG ACGCCGTGCC GTTCTTGCTG ATCTTCGTCA TCCTGTTCTT CATGCCGCGC GGCCTGTTCG GCGCCAAGAC GACGGAGCGG GTATGA
|
Protein sequence | MFSQILQFMF SGVTVGATYA LAALGFTLIY NASNVINFAQ GEFIMLGGIL TVFFFKTGLP LPVALLLAVA IPAMVGVLVE KLAIEPAKGA GVESLIIITI GASLVLRGLV QISFGKGAAS FPAFSGDAPI NIGGAALAPQ SLWVLGTTAV VVLALWLFFN RTVAGKAILA TSYDPLAAQL VGVNTQLVLL VSFALSAAIG AMGGILLTPI TMTSYDVGIM LGLKGFVAAV VGGLGSGLGA VVGGLLVGIV EALTAGYVSS AYKDAVPFLL IFVILFFMPR GLFGAKTTER V
|
| |