| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1514 |
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| Symbol | |
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| ID | 4021994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1688756 |
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| End bp | 1690084 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637961709 |
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| Product | thiamine pyrophosphate enzyme-like TPP-binding |
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| Protein accession | YP_568652 |
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| Protein GI | 91975993 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.155539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAGG CCTACACCAC GATCGCCTTC GACGCCGCCA AATGCGACGG CTGCCGGCAA
TGCATGAGCG CCTGCGCCAC CGCCAAGAAC GGCGCCGACG ACAGCGCACG GGCGCGCCTC
CAGGTGCTGC CGACGGACGG CGGCTTCGAA CTGGCGATGT GTCGCCAGTG CGGCGATCCG
AAATGCGTCA CCGTCTGTCC GGCCGGAGCA CTGGCCAAGG ACGGCGACAC CGGCGTGATC
GGATGGGACG CCGGCAAATG CGTCGATTGC CTGCTGTGCA CGGTCGGCTG CGCCTATGCG
GGGATCGCGC GCGACGAGAC CGACGGCCGC GTCGCCAAAT GCGATATGTG CGACGGCGCG
CCGGCCTGCG TCGCAGCCTG CCCGACCGCG GCGCTGAGCC ACATCACCAC CGCGCGCATC
TACAACGAAG TCGGCGACTG GGAGGATTTG TTCACGCCCG GCCTCGCCGG CTGCCAGGGC
TGCAACACCG AACTGCTGAT GCGTCACGCG CTGCGCCGCG TCGGTCCGGA TACCGTGCTG
GCGACGCCGC CGGGCTGCGT GCCGGGGATG GGATCGGTCG GCTATAACGG CCTGACCGGG
ACCAAGGTGC CGGTGTTTCA TCCACTCCTG ACCAATACCG CGCCGATGCT GGCGGGGGTC
AAGCGCCAGC TCAAGCGCAA GGGCCGCGAG GTGACGGCGA TGGCGATCGC CGGCGACGGC
GGCGCGTCCG ACGTCGGCTT CCAGTCGCTG TCGGGCGCCG CCGAGCGCGG CGAAGAAATC
CTGTTCATGG TGGTCGACAA CGAAGGCTAC ATGAACACCG GGATGCAGCG ATCGAGCTGC
ACGCCCTACG GCGCCTGGAC CTCGACCACG CCGGTGGGAC GCGAGTCCAA GGGCAAGACC
CAGGACGCCA AGAACCTGCC GCTGCTGATG GTCAACCATC GCTGCGCCTA TGTGGCGACC
GCTTCCACCG CCTTCATGCA GGATCTCTAC GACAAGCTCG ACAAGGCGAT CGCCGCCTCC
AAACAAGGCT TCGCCTATCT GCATGTCTAC TCGCCCTGCA CCACCGGCTG GCGGTTTCCT
ACCGACCAGA ACATGGAAGT GGCGCGCAAG GCGGTGGAGA CGAATTTCGT CATGCTCTGG
GAATTCACTC CGAGCAATGG CCTGCATTTC ACCCATCCGG TCGACGCGCC GCTGCCGATC
ACCGACTACC TCAAGGCGAT GGGGCGCTTC CGCCATCTCG ACGCCGATCA GATCCGGCAC
ATCCAGGCCA AGGTCGACGA GAACCGCGCC ATCATCGAAC AGCTCGCGAC CGGGGTGAGA
GCGGCCTGA
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| Protein sequence | MGQAYTTIAF DAAKCDGCRQ CMSACATAKN GADDSARARL QVLPTDGGFE LAMCRQCGDP
KCVTVCPAGA LAKDGDTGVI GWDAGKCVDC LLCTVGCAYA GIARDETDGR VAKCDMCDGA
PACVAACPTA ALSHITTARI YNEVGDWEDL FTPGLAGCQG CNTELLMRHA LRRVGPDTVL
ATPPGCVPGM GSVGYNGLTG TKVPVFHPLL TNTAPMLAGV KRQLKRKGRE VTAMAIAGDG
GASDVGFQSL SGAAERGEEI LFMVVDNEGY MNTGMQRSSC TPYGAWTSTT PVGRESKGKT
QDAKNLPLLM VNHRCAYVAT ASTAFMQDLY DKLDKAIAAS KQGFAYLHVY SPCTTGWRFP
TDQNMEVARK AVETNFVMLW EFTPSNGLHF THPVDAPLPI TDYLKAMGRF RHLDADQIRH
IQAKVDENRA IIEQLATGVR AA
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