Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1396 |
Symbol | |
ID | 4021873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1562771 |
End bp | 1563253 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637961588 |
Product | YbaK/prolyl-tRNA synthetase associated region |
Protein accession | YP_568534 |
Protein GI | 91975875 |
COG category | [S] Function unknown |
COG ID | [COG2606] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTCG ACTCCGTTCG CGCCTGGTTC GCGCAACACG CCCCGGACAT TACCGTCGAG GAATCCGACA AGAGCTCCGC CACCGTGCCG CTCGCAGCCG AAGCCCATGG CGTGCCGCCG GAGCAGATCG CCAAGACGCT GTCGCTGCGG GTCGGCGAAC GCGTCGTGCT GGTGGTGACC AGCGGCACGG CGCGGCTCGA CAACAAGAAG GCCAAGGCGG CGTTCGGCGC CAAGCCGAAG ATGCTCGGCG TGCACGAGGT CGCCGATCTC ACCGGTCATG AAGTCGGCGG CGTCTGCCCG TTCGGCCTGA AAGATCCGCT GCCGATCTAT TGCGACATCA CCCTGCAGGC GTTCGACATT GTGCTGCCGG CGGCGGGCTC CATCAACAGC GCGGTGCGGA TCGCGCCGCG GCGGATGGCG GAACTGGTCG GCGCCGAATG GGTCGATGTC AGCGAGATGC GCGCCGAACA GCAGGGGGCC TGA
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Protein sequence | MSLDSVRAWF AQHAPDITVE ESDKSSATVP LAAEAHGVPP EQIAKTLSLR VGERVVLVVT SGTARLDNKK AKAAFGAKPK MLGVHEVADL TGHEVGGVCP FGLKDPLPIY CDITLQAFDI VLPAAGSINS AVRIAPRRMA ELVGAEWVDV SEMRAEQQGA
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