Gene RPD_1364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1364 
Symbol 
ID4021841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1534130 
End bp1534762 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content62% 
IMG OID637961557 
Producturease accessory protein UreG 
Protein accessionYP_568503 
Protein GI91975844 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 
TIGRFAM ID[TIGR00073] hydrogenase accessory protein HypB
[TIGR00101] urease accessory protein UreG 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACTC ATCACGGTCC TTTGCGCGTC GGCATCGGCG GCCCGGTCGG GTCGGGCAAG 
ACGGCGCTGA TGGATCTGCT GTGCAAGTCG ATGCGCGAGC GCTACGACAT CGCCGCGATC
ACCAACGACA TCTACACCAA ATGGGACGCT GAGTTCCTGG TGCGGTCCGG GTCCCTGACT
CCCGATCGCA TCGCCGGCGT CGAGACCGGC GGCTGTCCGC ACACCGCCAT CCGCGAAGAC
GCGTCGATGA ATCTCGCCGC CGTGGCGGAG ATGCGGAGCA AGTTTCCCGG TCTCGATCTG
GTGTTGATCG AATCCGGCGG CGACAATCTC GCCGCCACTT TCTCTCCGGA ACTCGCAGAC
CTGACGATCT ATGTGATCGA CGTCTCTGCG GGCGACAAGA TACCGTCGAA GGGTGGTCCC
GGTATCACCC GTTCGGACCT GCTGGTCATC AACAAGATTG ATCTGGCCCC GTATGTCGGC
GCGTCGTTGG ACAAGATGGA TGCCGATGCC AGGCGGATGC GCGGGGAGCG GCCGTTCGTG
ATGACCAATC TCAAGACGCG CGAGGGGCTC GAGCGCATTC TGAGCTTCAT CGAGACCAAG
GGCGGCTTGA AACCAAAGGC GGACACTGCC TGA
 
Protein sequence
MSTHHGPLRV GIGGPVGSGK TALMDLLCKS MRERYDIAAI TNDIYTKWDA EFLVRSGSLT 
PDRIAGVETG GCPHTAIRED ASMNLAAVAE MRSKFPGLDL VLIESGGDNL AATFSPELAD
LTIYVIDVSA GDKIPSKGGP GITRSDLLVI NKIDLAPYVG ASLDKMDADA RRMRGERPFV
MTNLKTREGL ERILSFIETK GGLKPKADTA