Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1353 |
Symbol | |
ID | 4021830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1524114 |
End bp | 1525250 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637961546 |
Product | hypothetical protein |
Protein accession | YP_568492 |
Protein GI | 91975833 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTTCTG CGCCAGTTCT GACTGTAGTG ACCGACGGCG ACGTGCTGGA ACTGCATCCC GGCGGCGCGT GGATCGCCAG CCAATCGGCC GCGCTGGAAC GGCTGTTCGA GGGCGTCGCG CCGCAGGTCG CCGCTGCAAA ATCACTCAAG ATCGACATGA CCGAGGTGAT CGAGATCGAC ACCATCGGCG CTTGGCTGCT GGAGAAGGCG TCACGCGAGG CCGCGCAGGC TGGTCGCACC GCGCATTTCG TCGGGGTCGG CGAACGCTAC GCCGGGTTGA TCGAAGAGGT CCGGCAAGTC AACCGCCACA GACCGACGCC GAAACCCAAG GTCAATCCGA TCATCGCGCG ACTCGATCAG GTCGGTCGCT CAGCCTGGAG CGCCACGCAG GACATCGCGG TATTCCTCGA CATGTTCGGT GCGCTCGGCG TCGCGTTGCT CGGCGTGCTG CGGCGGCCGC GTTCGCTGCG GCTGACCTCG TTGACCTACC AGATCTATCG CGTCGGCTGG CGGGCGATCC CGATCGTCGT GCTGATCACC TTCTTGATCG GCGCGATCAT CGCGCAGCAG GGCATTTTCC ACTTCCGCAA ATTTGGTGCG GAATCCTACG TGGTCGACAT GGTCGGCATC CTGGTGTTGC GCGAGATCGG CGTTCTGATC GTCGCCATCA TGGTCGCCGG CCGCTCGGGC AGCGCCTACA CGGCCGAACT CGGCTCGATG AAAATGCGCG AGGAGATCGA CGCGCTATCG ACCATGGGGC TCGACCCGGT CGAGGTGCTG ATCCTGCCAC GCATCATCGC GCTGGTGATC GCGCTGCCGA TCCTGACCTT CATTGGATCG ATGTCGGCGC TGTACGGCGG ATTGCTGACC GCGTGGTTCT ACGGCGGCAT GCAGCCCGCG GTATACATCG CGCGGTTGCA CGAGGCGGTG TCGCTCAACA GTTTCGAGGT CGGGATCTGG AAGGCGCCGT TCATGGCGCT GGTGATCGGC ATCGTCGCCT GCAGCGAGGG CCTGCGGGTC AAGGGCAGCG CCGAGTCGCT CGGCCTGCAG ACCACCACTT CGGTGGTGAA GTCGATCTTT CTGGTGATCG TGCTCGATGG CCTGTTCGCT GTATTCTTCG CCTCGATCGG GTTGTAG
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Protein sequence | MISAPVLTVV TDGDVLELHP GGAWIASQSA ALERLFEGVA PQVAAAKSLK IDMTEVIEID TIGAWLLEKA SREAAQAGRT AHFVGVGERY AGLIEEVRQV NRHRPTPKPK VNPIIARLDQ VGRSAWSATQ DIAVFLDMFG ALGVALLGVL RRPRSLRLTS LTYQIYRVGW RAIPIVVLIT FLIGAIIAQQ GIFHFRKFGA ESYVVDMVGI LVLREIGVLI VAIMVAGRSG SAYTAELGSM KMREEIDALS TMGLDPVEVL ILPRIIALVI ALPILTFIGS MSALYGGLLT AWFYGGMQPA VYIARLHEAV SLNSFEVGIW KAPFMALVIG IVACSEGLRV KGSAESLGLQ TTTSVVKSIF LVIVLDGLFA VFFASIGL
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