| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1324 |
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| Symbol | |
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| ID | 4021801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1489802 |
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| End bp | 1491280 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637961517 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_568463 |
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| Protein GI | 91975804 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.378775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATTCTT CAACCCCGCA GCTTCGCAGA TCGCCGATAC GCTGGATCGC CATCGCCGCC
ACGCTGATGC TGATGGCGGC GCCGCGGCTC GCTTCCGCGG AAGCGTTACT GCTGATCGAG
GCCGACACCG GCAAGGTGCT GCAGGCAGAG AACGCCACCT ACCCGTGGTA CCCGGCGTCA
GTCACCAAGA TCATGACCGC CTACGTCACG CTCAAGGCGG TAAAGGAAGG CCGGCTGACG
CTCGACTCGC TGCTGACCGT ATCGCCGGTC GCGGCCGCGC AATCGCCGTC GAAGATGGGC
TTCCGCCCGG GCACCCAGAT CACCGTCGAC AACGCGCTGA AGATGATGAT GGTGAAGTCG
GCCAACGACA TGGCCGTCGT GCTGGCGGAA GGCGTCGGCG GTTCGATCGA CGGCTTTTCG
GCGACGATGA ACGCAACCGC GCAACGGCTC GGCATGACGC AGACGCACTA CGTCAATCCG
AACGGTCTTC CCGCCGACGG TCAGGTCACT TCGGCACGCG ATCTTGGGAT TCTGGCGCGG
GCGATGATCC GCGACCTGCC GGAATACGAG TATTTCTCTC ACATCCCGGC GATCCGCTTC
GGCAAGCGCG TCACGCATAA TTTCAACAAG CTGATCGGCC GCTACCCCGG CGCCGACGGA
TTCAAGACCG GGTTCATCTG CGCCTCCGGC TACAACCTCG TCGCCAGCGC CACCCGCAAC
GGGCGCCGCC TGATCGCCGT CGTGCTCGGC GCCAATTCCG GTCAGGATCG CGCGGTCAAG
GCGGCGCAGC TCCTTGAGCG TGGTTTCTCC GCCAATACGC TGGCGTGGCT GACGCCGTCG
CTCGGCACTG TCGACAACCT CGCGCCGATC GACGCGACCC CGCCGAATCT GCGCGAGGAG
ATGTGCGGAC CCAAGCGCAA GCGGCCGGCG AGCGACGAGG ACGAGCAGGT CGCCAGCGTC
ATCGCCAATG GCGAGACCGC GCTGTCGATG TTCTCTCCGC CGGTGTTGCG TCCCGTCGAC
ATGATCGCGG CGGCGCCCGC AGCGACCGAG CCCGTTCAGG TCTACACCGG CCCGACCCGG
ACCGGCGCAG CCTTGATCGC GGTTGCGGTC AGCGACGCCG AGCAGCAGGC GGCCGAGGGC
AAGAAGACCA AGAAGACGGC GAAGAAAAAG GGCGCGAAGC CGAAGGACGA AGCCAAGGAA
GCGACCGCCG GCGAAAAGCC CGGCAGCCGG ACCGCGGTGA CCATCGATAC CACCAAGCCC
AATCCTTCCG GCGCCAAACC TGCAAACGTC AAGCCTGCAA ACGCCAAGCC TGCAGATGCC
AAGCCCGCCG GCCCCAAGCA TGCTCACGCG AAGCCCGAAA CCCCGACCGC GGCAAAGCCC
GCTGCTGCGC CGAAGCCCAA GCCGGCGACG GCTGCGGTGG CCAAGCCGGC TCCGAAAGGC
GCTGCCGGCG AGGCCAAGCC CGTCAAGCCC GGCACCTGA
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| Protein sequence | MHSSTPQLRR SPIRWIAIAA TLMLMAAPRL ASAEALLLIE ADTGKVLQAE NATYPWYPAS
VTKIMTAYVT LKAVKEGRLT LDSLLTVSPV AAAQSPSKMG FRPGTQITVD NALKMMMVKS
ANDMAVVLAE GVGGSIDGFS ATMNATAQRL GMTQTHYVNP NGLPADGQVT SARDLGILAR
AMIRDLPEYE YFSHIPAIRF GKRVTHNFNK LIGRYPGADG FKTGFICASG YNLVASATRN
GRRLIAVVLG ANSGQDRAVK AAQLLERGFS ANTLAWLTPS LGTVDNLAPI DATPPNLREE
MCGPKRKRPA SDEDEQVASV IANGETALSM FSPPVLRPVD MIAAAPAATE PVQVYTGPTR
TGAALIAVAV SDAEQQAAEG KKTKKTAKKK GAKPKDEAKE ATAGEKPGSR TAVTIDTTKP
NPSGAKPANV KPANAKPADA KPAGPKHAHA KPETPTAAKP AAAPKPKPAT AAVAKPAPKG
AAGEAKPVKP GT
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