Gene RPD_1321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1321 
Symbol 
ID4021798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1484969 
End bp1485952 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content60% 
IMG OID637961514 
Productalpha/beta hydrolase fold 
Protein accessionYP_568460 
Protein GI91975801 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.918656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTCG TCAGCAATGA AACAACCATA CCGAGGAACG CCAAGCAGGG TTATGCACGG 
TCAAACCTCG CCAACCCGGT GGGCGGCGCA CGTGCCGACA TCGTCACGAA AGTCGGCCGG
CTCGCGACCT ACTCGCTCGG CATGACGTCT AGCGACGATA CGACGCGGCC GCTGCTGTTG
GTGCACAGCA TCAACGCCGC AGGCTCCGCC TTCGAAATCA AAACGCTGTA TGATCACTAC
GCCAAGCATC GCCCGGTTCA CGCCGTCGAC CTCCCCGGCT TCGGCCAGTC CGACCGCGAC
GACCGCGAGT ATACAGCGCG GCTGATGACC GATGCGGTCC ATGCGGCGAT CGCACGCGTG
CAGGAAGTTC ACGGACCGGA GCCGATCGAT GTGGTGGCGC TGTCGTTGTC ATGCGAATTC
GCCGCACGTG CAGCGGCAGA GAAGCCCGAC GCGTTCAATA CTCTCGGCCT GATCAGTCCG
ACCGGCTTCG AAGGCAAGGC GCGCGACGAG GCGGAGCCGG CCACGCGTGG CCAATCCTGG
TTGCTGAGCA CACTGAGATT CAAACTGTGG GATCGAGGCT TCTTCAATCT TTTAACAACG
AGGCCGGTGA TTCGAAAGTT CCTCGAAAAG GCCTGGGGCT CGAAAGACAT CGACGAGTCG
ATGCTCGATT ACGACTACCA TACCACCCAT CAACCCGGCG CACGCTACGC GCCGTACTAC
TTTGTTTCCG GCTATATGTT CAGCAAGGAT ATCCTTCGCA TTTACGAATC GCTACGCCTG
CCGGTTTGGA TGGCGCATGG CGTGCGTGGC GACTTCGTGG ATTACCGCCA CAAGAGTCGC
GTCGCGGGAC GCTCGAACTG GACTATCGTA AAGTTCGACG CAGGCGCGAT GCTTCACTTC
GAAGTTCTGG GTGAGGTCGT CCGTTCATAC GATCAGTTCC TGGCGGTGTC AGCGCCGACT
GACGCGACTG CCGTGAGCGC CTGA
 
Protein sequence
MSVVSNETTI PRNAKQGYAR SNLANPVGGA RADIVTKVGR LATYSLGMTS SDDTTRPLLL 
VHSINAAGSA FEIKTLYDHY AKHRPVHAVD LPGFGQSDRD DREYTARLMT DAVHAAIARV
QEVHGPEPID VVALSLSCEF AARAAAEKPD AFNTLGLISP TGFEGKARDE AEPATRGQSW
LLSTLRFKLW DRGFFNLLTT RPVIRKFLEK AWGSKDIDES MLDYDYHTTH QPGARYAPYY
FVSGYMFSKD ILRIYESLRL PVWMAHGVRG DFVDYRHKSR VAGRSNWTIV KFDAGAMLHF
EVLGEVVRSY DQFLAVSAPT DATAVSA