Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1282 |
Symbol | |
ID | 4021759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1445629 |
End bp | 1446252 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637961475 |
Product | putative outer membrane protein |
Protein accession | YP_568421 |
Protein GI | 91975762 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.494917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.183567 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAAT TTGCAATGGC CGCGGCGACC ATTCTCGCCG CAGGAGCTTC GACGGCACAG GCCGCGGACA TGGGCTATTA CGGCTCGCGG ACGCCCTACA CCGTCAATCA GCCGCTGAAT GCCTTCAGCT GGGCCGGGCC GTATCTGGGC GGCAACCTCG GCTACTCGTT CGGCAATGTC ACCAACAGCA TCACCAAGCC GTCCGGCTTC AACGGTGGCG TTCAGGGCGG CTATAACTGG CAGAGCGGAA ACATCGTCTT CGGCCTCGAG GGCGACATTC AGTTCTCGAC CGCGGACGAC ACCTTCGCGC CTTACAAGTT TTCGAACCCC TGGTTCGGGA CCGCGCGTGG TCGTGTCGGC TACGCGATGA ACGACCTGCT GATCTACGCC ACCGGCGGTT TCGCTTTCGG TCAGTTGAAG GGCGAGCGCC TGCTGTCGAC AGAGAGCCAC AGTTCCGCGG GCTGGACGGT CGGCGCCGGC GCCGAATTCG CCTTCGCGCC GAAACTCAGC GCCAAGGTCG AGTATCTTTA CGGCAGCCTG TCCACCAATA ACTTCTTCAT CACCGGTGCC CCGAACGGCT ACAATTTCGG GGTGGTGCGC GCGGGCATCA ACTATCACTT CTAA
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Protein sequence | MRKFAMAAAT ILAAGASTAQ AADMGYYGSR TPYTVNQPLN AFSWAGPYLG GNLGYSFGNV TNSITKPSGF NGGVQGGYNW QSGNIVFGLE GDIQFSTADD TFAPYKFSNP WFGTARGRVG YAMNDLLIYA TGGFAFGQLK GERLLSTESH SSAGWTVGAG AEFAFAPKLS AKVEYLYGSL STNNFFITGA PNGYNFGVVR AGINYHF
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