Gene RPD_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1220 
Symbol 
ID4021696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1379271 
End bp1379705 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content61% 
IMG OID637961412 
Producthypothetical protein 
Protein accessionYP_568359 
Protein GI91975700 
COG category[S] Function unknown 
COG ID[COG2852] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.975578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAGC GCCAGATCAG CGACTTCAAG CGCGCCACCG CGAACAAACT GCGTGCTAAC 
AGCACCGCTG CAGAAGACAT CCTGTGGCGG CGTCTGCGAC GAATGAATGT GGAAGGAAGT
CACTTCAGAC GGCAGGTGGT GATCGGGCCC TACATCGCCG ATTTCGCCTG CCTCGCGAAG
CGACTGATCA TCGAGGTCGA CGGTTCGCAA CACGGCGAGG AAGACGGACT GAAGCGCGAC
GAGGTCCGTA CGCAATGGCT GCAGTCCGAA GGCTACCGGG TGATCCGATT CTGGAACAAT
GATGTGATGA GCAAGACCGA CGCCGTGATG GACGCCATCT ACAACGCCAC CGCTGTCACC
CCACCCCGCC TGCCTTCGGC AGGCGACCCT CCCCCTCCAG GGGAGGGTGA TGCCGTCCGT
GGGGAGAACG AATAA
 
Protein sequence
MVKRQISDFK RATANKLRAN STAAEDILWR RLRRMNVEGS HFRRQVVIGP YIADFACLAK 
RLIIEVDGSQ HGEEDGLKRD EVRTQWLQSE GYRVIRFWNN DVMSKTDAVM DAIYNATAVT
PPRLPSAGDP PPPGEGDAVR GENE