| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1217 |
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| Symbol | |
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| ID | 4021693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1376520 |
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| End bp | 1377419 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637961409 |
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| Product | peptidase S49 |
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| Protein accession | YP_568356 |
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| Protein GI | 91975697 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACG CGGCGACAGG TCGCAGCTCC TCGGGCGTGC TCGCGGGGTT CGGCAAACTG
ATTCCGGCAC GGTTTCGCTC CGACATTCCC GTGGTTCCGG TGGTGCGCTT GTCGGGTGTG
ATCGGCGCCG TCACGCCGCT TCGCCCGGGC ATGACTCTCG CGGGAGTGGC CAGGCTGCTG
GAGCGCGCAT TCGCGACGCG TAACGCCAAG GCGGTGGCGC TGGCGATCAA TTCGCCCGGC
GGTTCGCCGG TTCAGTCGCG GCTGATCTAT CTGCGCATCC GCGCGCTCGC GGCGGAAAAG
AAACTGCCGG TGATCGCCTT CGTCGAGGAC GTCGCCGCGT CCGGCGGCTA CATGATCGCC
TGCGCCGCCG ACGAGATCTA TTGCGATCCG TCGTCGATCG TCGGCTCGAT CGGCGTGGTC
GGCGGCGGCT TCGGCTTTCA GGAAATGATC AAGAAGATCG GCGTCGAGCG CAGGCTGTAC
ACGGCCGGCG ACCACAAGGC GCAGCTCGAT CCGTTTCTAC CCGAGGACCC GGCTGACGTC
GCCCGGGTCA AGGCATTGCA GCGGGAGATC CACGCGCTGT TCATCTCGCT GGTGAAGGAC
AGCCGCGGCG CGCGGCTGAA GGGCGCCGAG GATGTGCTGT TCTCCGGCGA GTACTGGGCC
GGCGCAACCT CGGTGTCGCT CGGACTCAGC GACGCGATCG GCGATCTGCG CGCGGTGCTC
CGCGCGCGCT TCGGCGACAA GGTGCGCACG CCGGTGGTCG CGCCGCCCTC CGGCCTGCTG
GCGAGCTTCA TGCGGCGATC GTCCGGCGCG GAGGCGTCGC TCGATGGGCT CGCGGCGCTC
CCCGAATCGC TGATCTCGGC GCTGGAAACG CGCGCGATCT GGGCGAAATA TGGCTTCTAG
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| Protein sequence | MNDAATGRSS SGVLAGFGKL IPARFRSDIP VVPVVRLSGV IGAVTPLRPG MTLAGVARLL
ERAFATRNAK AVALAINSPG GSPVQSRLIY LRIRALAAEK KLPVIAFVED VAASGGYMIA
CAADEIYCDP SSIVGSIGVV GGGFGFQEMI KKIGVERRLY TAGDHKAQLD PFLPEDPADV
ARVKALQREI HALFISLVKD SRGARLKGAE DVLFSGEYWA GATSVSLGLS DAIGDLRAVL
RARFGDKVRT PVVAPPSGLL ASFMRRSSGA EASLDGLAAL PESLISALET RAIWAKYGF
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