| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1173 |
|---|
| Symbol | |
|---|
| ID | 4021649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1331216 |
|---|
| End bp | 1331557 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637961365 |
|---|
| Product | hydrogenase nickel insertion protein HypA |
|---|
| Protein accession | YP_568312 |
|---|
| Protein GI | 91975653 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
|---|
| TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.305446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGAGA TGGCGCTGTG CGAAAGCATG ATCGAGATCA TCGAACGCGA GGCGCGCGAC
CAGCACTTCG CCCGCGTCCG CGCGGTGTGG GTCGAGATCG GCGCGCTCAG CCATGTCGAG
CCGGAGGCGA TGCGGTTCTG CTTCTCCGCC GTCGCGCATG GCGGCATCGC CGCCGACGCG
CGGTTCGAGA TCGTCAGCGT CTCGGGCGCG GCCTGGTGCA TGAGCTGCAG CAAGACCGTG
CCGCTGGCGC AACGCAGCGC GCCGTGCCCG GATTGCGGCG GATATCAATT GCAGGTCACC
GCGGGCGACG AATTGCGGGT CAAGGAACTG GAGGTCGATT GA
|
|---|
| Protein sequence | MHEMALCESM IEIIEREARD QHFARVRAVW VEIGALSHVE PEAMRFCFSA VAHGGIAADA
RFEIVSVSGA AWCMSCSKTV PLAQRSAPCP DCGGYQLQVT AGDELRVKEL EVD
|
|---|
| |