| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1164 |
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| Symbol | |
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| ID | 4021640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1325400 |
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| End bp | 1326128 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637961356 |
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| Product | nickel-dependent hydrogenase b-type cytochrome subunit |
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| Protein accession | YP_568303 |
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| Protein GI | 91975644 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
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| TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.210413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCACGG AGATCGCACG GGTTCAGGGC GCGCTCGACT CGGCCGGCGA ACGCGCGAGG
TCGCTGCAGA CCGTCTATGT CTATCAGGCT CCGGTGCGGC TGTGGCACTG GGTCAACGCG
CTGCTGATCG TGGTGCTGTG CGTCACCGGC TATTTCATCG GCACGCCGCT GCCGTCGGTG
CCGGGCGAGG CCTCCGCTTC GTTTCAGATG GGCTATATCC GCTTCGCCCA TTTCGCGGCC
GGCCAGACGC TGATCGTGTT CTTCCTGCTG CGGGTGTACT GGGCGTTCGT CGGCAACAAA
TATTCCAAGC AGATATTCTG GCTGCCGATC ACCAACAAGA CCTGGTGGTG GGGCATGTTG
TACGAGCTGA AATGGTATCT GTTCCTGGTG CGCGATCCCA AAAAATACAT CGGCCACAAC
CCGCTGGCGC ATGTCGCGAT GTTCTCCTTC ATGGTGTTCA TGGTGCTGAT GATTCTCAGC
GGCATGGCGC TGTACTCCGA AGGGCACGGC ATCGACAGCT GGCAATACAA GCTGTTCGGT
TTCATGTTCG CGATTTTCCC GAATGGCCAG ACCCTGCATA CGCTGCATCA TCTCGGGATG
TGGGCGATCG TGGTGTTCGT CGTCGTTCAC ATCTACGCCG CGGTGCGCGA GGACATCCTC
AGCCGCCAGA GCATGATCTC GTCGATCGTG TCCGGCGAGC GCCTGTTCCG CGACGATCTG
CCGGATTGA
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| Protein sequence | MTTEIARVQG ALDSAGERAR SLQTVYVYQA PVRLWHWVNA LLIVVLCVTG YFIGTPLPSV
PGEASASFQM GYIRFAHFAA GQTLIVFFLL RVYWAFVGNK YSKQIFWLPI TNKTWWWGML
YELKWYLFLV RDPKKYIGHN PLAHVAMFSF MVFMVLMILS GMALYSEGHG IDSWQYKLFG
FMFAIFPNGQ TLHTLHHLGM WAIVVFVVVH IYAAVREDIL SRQSMISSIV SGERLFRDDL
PD
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