| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1139 |
|---|
| Symbol | |
|---|
| ID | 4021615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1294519 |
|---|
| End bp | 1295382 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637961331 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_568278 |
|---|
| Protein GI | 91975619 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.124287 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGAAC TCTGGCAGGC CTTGGCGCAA GGCGTTCTGA TCGGAAGCAC CTACGGGTTG
TTGGCGCTGG GCATGGGGCT GGTCTATGGC GTCAGCGGCA TCGTCAATTT CGCCCATGGC
GATTTCATCT CGCTGGCGAT GTTCATCTCG CTCGCGCTGT TCTCCGCCTT CGCGCTGGAC
CCTTACGTCT CGGTGCTGAT CACCATCCCG GTGATGGCGG CGCTCGGCGC GTTGGTCTAT
CGCTTTCTGC TGCGGCCGAT GGCGGGGCAT CAGTTCCTGA TGATCGTGCA GCTCACGCTC
GGTCTCAGCC TGTTGCTGCA GAACGGCATC ATGATGGTGT TCGGCGGCCA GCCGGCGCGC
ACGCCCTCGA TCGTCGAATC CAAGCTGATC ATTCTCGGCG ACGTGGTGCT GCGGATGCCG
CATGTGATCG CCTTCGTCGT CGCCTTCGCG ATGGCGATCG GGCTGTATGT GATGCTGCGC
TCGACCGATT TCGGCCGTTC GATCCGCGCC GTGCATCAGA ACGCGCGCGC TGCGGCGCTG
ATGGGCGTCG ACGTCGGCCG CGTCCAGGTC GTCACCTTCG CGATCGGCCT CGGCATTCTC
GCGGTCGCCG CGGCGCTGTT GCTGCCGGGC ACGCCGATCC AGCCGACCCA GGGCTTGCAG
TACACCGTGA TCACGCTGCT GGTCGTGGTG CTCGGCGGCA TGACGAATTT CGTCAGCATC
ATGATCAGCG GTCTGGTGAT CGGCATCGCC GAAGCATTCG GCACGGTCTA TGTCTCCGAC
ACGCTGGGGC GGCTGGTGCC CTATGCGATC TTCGTTCTGA TCATGCTGTT CCGTCCGCAG
GGCCTGACCT GGAGGACGTC ATGA
|
|---|
| Protein sequence | MNELWQALAQ GVLIGSTYGL LALGMGLVYG VSGIVNFAHG DFISLAMFIS LALFSAFALD
PYVSVLITIP VMAALGALVY RFLLRPMAGH QFLMIVQLTL GLSLLLQNGI MMVFGGQPAR
TPSIVESKLI ILGDVVLRMP HVIAFVVAFA MAIGLYVMLR STDFGRSIRA VHQNARAAAL
MGVDVGRVQV VTFAIGLGIL AVAAALLLPG TPIQPTQGLQ YTVITLLVVV LGGMTNFVSI
MISGLVIGIA EAFGTVYVSD TLGRLVPYAI FVLIMLFRPQ GLTWRTS
|
|---|
| |