Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1133 |
Symbol | |
ID | 4021609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1288095 |
End bp | 1289651 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637961325 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_568272 |
Protein GI | 91975613 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.508244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.50206 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTGA CGTCGGGCCT TCGCAAGGCG ACCGCGTTCC GCGCGGACCA GACGGCGATC GTCGCCGGCG AACGCAGCTT CACGCATGGC GAATTGCTCG ATCGGGTGTC GCGGCTGGCG TCCGCGTTCC GCGCGTTCGG CGTCCGGACC GGCGATCGCG TCGCGATCCT CGCCGCCAAC GGCCATCCTT ATGTCGAGTG CTACTTCGCC GTGCTCTGGG CCGGCGGCGT CGTCGTGCCG GTCAATTCCC GTTTCGCGCT CGCCGAAATG ATCGAGCAGG TGAACGACGC CGAGCCGTCG ATCCTGGTGT GCGATCAATC GTTTGCGGAT ATCGCGGTGC AGATCGCCGA GGCCTGTTCG TGCCTCACCG CGATCGTGGC GACTGCGGCC GCGGCGGGCC TGCCCGGCGT GTACGACTAC GAGTCCGCAG TGGCGAATGC CGAGCCTTGC GACGATGCCG GGCGCGGCGG CGAGGATCTC GCTTGTCTGT TCTACACCGG CGGCACCACC GGCCGGTCGA AGGGCGTGAT GCTCAGCCAT CGCAATCTCT GGGTGAATGC GGTCGTCACC GCGATGTCGT TCGGCTTCGA CGAGTCCACG GTGGCGCTGC ACGCCGGCCC GCTGTTTCAT CTCGGCGCCG GTGCGCGGGT CTATACGACG TCGATCATGG GCGGGCGGCA CGTCGTGATC CCGCGCTTTG CGCCGACCGA GGTGCTGGAG GCGATCTCGC GGCACAAGGT GACGGTTGCG ACCTTCGTGC CGACCATGCT CGGCATGATC CTTCAACTAC CGGATCTGGA TTCCTACGAT CTCTCCAGTC TGAAGCTGAT CACCTACGGC GCTTCGCCGA TGCCGGAGGC CGTGCTGCAG GAATGTCTGC GGCGTTTTCC GTCGATCAAA TTCGGCCAAT CCTACGGCAT GACCGAATTG TCGCCGGTGG CGACGATTCT CGCGCCCGAC GATCATCTGC CCTCGGCGCC GCGGCGACGC CTGCGCTCGG CGGGCCGGCC GATCGTCTCG GCGGAGGTGA AAGTGGTCGA CGCCGAGGAT CGCGAGCTGA AGCGCGGTGA GGTCGGCGAG ATTGTGGTGC GCGGCCCGAT GGTGATGATG GGCTATTGGC GCAAGCCCGA GCTGACCGCG GAGGCGCTGC GCGGCGGCTG GATGCACACC GGCGATTCCG GCTCGTTCGA CGCCGACGGC TATCTCTACA TTTCCGATCG CATCAAGGAC ATGATCATCA GCGGCGGCGA GAACGTGTAT TCGATCGAGG TCGAGAACGC GGTGCTGACG CATCCCGAGG TGATGCAATG CGCGGTGATC GGAATCCCGC ATCCGAAATG GGGCGAGGCG GTGCACGCCG TCGTGGTGCG GCGACCCGGT TCGTCGCTGT CGGCCGAGGA GCTGATAGCC TTCTGCCGCT CGGCGATCGC CGACTACAAA TCGCCGCGCA GCGTCGAATT CCGCGACGAT CCGCTGCCGC TGTCGAGCGT CAACAAGGTC AACAAGGCGG CGCTGCGTCA GCCCTATTGG AAGGACAGGC CGCGTCAGCC GAGCTGA
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Protein sequence | MQLTSGLRKA TAFRADQTAI VAGERSFTHG ELLDRVSRLA SAFRAFGVRT GDRVAILAAN GHPYVECYFA VLWAGGVVVP VNSRFALAEM IEQVNDAEPS ILVCDQSFAD IAVQIAEACS CLTAIVATAA AAGLPGVYDY ESAVANAEPC DDAGRGGEDL ACLFYTGGTT GRSKGVMLSH RNLWVNAVVT AMSFGFDEST VALHAGPLFH LGAGARVYTT SIMGGRHVVI PRFAPTEVLE AISRHKVTVA TFVPTMLGMI LQLPDLDSYD LSSLKLITYG ASPMPEAVLQ ECLRRFPSIK FGQSYGMTEL SPVATILAPD DHLPSAPRRR LRSAGRPIVS AEVKVVDAED RELKRGEVGE IVVRGPMVMM GYWRKPELTA EALRGGWMHT GDSGSFDADG YLYISDRIKD MIISGGENVY SIEVENAVLT HPEVMQCAVI GIPHPKWGEA VHAVVVRRPG SSLSAEELIA FCRSAIADYK SPRSVEFRDD PLPLSSVNKV NKAALRQPYW KDRPRQPS
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