Gene RPD_1127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1127 
Symbol 
ID4021603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1282175 
End bp1283593 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content69% 
IMG OID637961319 
Productbifunctional enoyl-CoA hydratase/phosphate acetyltransferase 
Protein accessionYP_568266 
Protein GI91975607 
COG category[C] Energy production and conversion
[I] Lipid transport and metabolism 
COG ID[COG0280] Phosphotransacetylase
[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.345508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCAGA TCCAGAACCG CACCTTCGAC GAGATCGCGG TGGGGGACAC CGCGAGCCTG 
GTGCGGACGC TGACCTATCG CGACATCGAG GTGTTCGCGG TGATGTCGGG CGACGTCAAT
CCGATGCATG TCGACGCCGC CTTCGCCAAA AGCGATCAAT TCCATCAGGT GGTGGCGCAC
GGCATGTGGG GCGGGTCGCT GATCTCGACC CTGCTCGGCA CGCAACTTCC CGGCCCCGGC
ACGATCTATC TCGACCAGTC GCTGCGTTTC GTTCGCCCGG TGCTGCTCGG CGACACCATC
ACCGTCTCCG TCAAGGTGAA GGAGAAGAAC GAGGCGAAGA AGCGGCTGCT GCTGGATTGC
CGCGCCACCA ATCAGAAAGG CGAGGAGGTG ATCGTCGGCC TCGCCGAGGT GCTCGCTCCG
GTCGAGAAGA TCTCCCGCCC GCGCGTGCAT CTGCCGGAGA TCGATCTGCA CCCGGCGGCG
CGGCGCTACG AACGGCTGAT CGAGATGACG CAGGGGCTGG AGCCGCTGCG CGTCGCGGTG
GTGCATCCGG TCGATCCGCC CTCGCTGCTC GGCGCCGTCG AGGCGGCGCG CGCCGGGCTG
ATCGTGCCGG TGCTGGTCGG CCCCGATGCG AAGATCCGCG CCGCCGCCGC CCAGGCCGAG
GTCGATCTGT CGCATTTCGA CATCGTCGCG ACCGAGCACA GCGACGCCGC GGCTGCAGCC
GCGGTGGCGC TGGCGCGCGC CGGCAAGGTC GAGGCGCTGA TGAAGGGCGC GCTGCATACC
GACGAACTGA TGCGCGCGGT GGTCGATCCG GCGCGTGGAT TGCGCACCGC GCGGCGCATC
AGCCACGTCT ATGCGATCGA TGCGCCGGAC TATCCGCGGG CGCTGCTGGT CACCGACGCC
GCGATCAACA TCTACCCGAC ACTGACCGAC AAGCGCGACA TCATCCAGAA CGCGATCGAT
CTGGCGCACG CGCTCGGCAT CGGCCAGCCG CGGGTGGCGA TCCTGTCGGC GGTCGAGACC
GTCACCGAGA GCATCCGCTC GACGCTCGAC GCCGCGGCGC TGTGCAAGAT GGCCGAGCGC
GGCCAGATCA CCGGCGGCAT TCTCGACGGA CCTTTGGCGT TCGACAATGC GGTGTCGGCC
GAGGCGGCCA AGACCAAGGG TATCGTCTCG CCGGTCGCCG GCCGCGCCGA TATCTTCGTG
GTGCCCGACC TCGAGGCCGG CAACATGCTG GCCAAGCAGC TCGAATATCT CGCCCGCGCG
CATGTTGCCG GCATCGTGCT CGGCGCGCGC GTCCCGATCA TCCTCACCAG CCGCGCCGAC
AAGACCCTGG CCCGGCTCGG CTCCTGCGCG ATCGCGCTGC TGGTCGCGCG CCACAGGACG
GCGGCGCTGC CCAGCGTGTC GTCCGGAGGC GCGGCATGA
 
Protein sequence
MEQIQNRTFD EIAVGDTASL VRTLTYRDIE VFAVMSGDVN PMHVDAAFAK SDQFHQVVAH 
GMWGGSLIST LLGTQLPGPG TIYLDQSLRF VRPVLLGDTI TVSVKVKEKN EAKKRLLLDC
RATNQKGEEV IVGLAEVLAP VEKISRPRVH LPEIDLHPAA RRYERLIEMT QGLEPLRVAV
VHPVDPPSLL GAVEAARAGL IVPVLVGPDA KIRAAAAQAE VDLSHFDIVA TEHSDAAAAA
AVALARAGKV EALMKGALHT DELMRAVVDP ARGLRTARRI SHVYAIDAPD YPRALLVTDA
AINIYPTLTD KRDIIQNAID LAHALGIGQP RVAILSAVET VTESIRSTLD AAALCKMAER
GQITGGILDG PLAFDNAVSA EAAKTKGIVS PVAGRADIFV VPDLEAGNML AKQLEYLARA
HVAGIVLGAR VPIILTSRAD KTLARLGSCA IALLVARHRT AALPSVSSGG AA