| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1110 |
|---|
| Symbol | |
|---|
| ID | 4021586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 1261350 |
|---|
| End bp | 1262609 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637961302 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_568249 |
|---|
| Protein GI | 91975590 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCC TGAAAAAAAG CCAGTTCGAG CGGGTTCTCG CTCTCGAATC CGGCACGTCT
GCGCAGACCG CGACGCCGCC GCGCGATGCC GGCGTGACCG ACCGAACGGC GCGGTCGGCG
AAGCGCGCGC GCGTATTGCT GATTCAGACC CAGGCCGAGA ACGCAGGCGC GCAGGAAATC
TCCCGGCTGG TCGGCGCCGG CCTCGCCGCG CGCGGCTACG ACGTCCACAA CCTGTTCTTC
TTTCGGCAGT CGCTCGCGTT CGACGAACCG CCGCAGACCG TCTATTGCGC GCCGCATCGG
CCGGGCGATC CGCTGTCGTT CCTGCGGTTC CTCGGCGCGC TGTATGCGCG CATCCGCCAG
CTTCGCCCCG ATGTCGTGCT GACGTTTCAG CACTACGGCA ATTCGATCGG CGGAATCGTA
TCGCGGCTGG CGAGCCCCGC TCCGGTGATC GCCAACCAGG TCTCGGCGCG ATTGACGATG
CCGGGCTGGC TGAGCGGCGT CGATCGCCTG ATGGGACAGC TCGGGGTTTT CGACAGCATC
ACCGTCAATT CGCACGACAT GCTGCGCGAC TATTCGCGCT ACCCCGAAAG CTATCGCAAG
CGCCTGACGC ACGTACCGCA CGGGTTCGAC CAAAAGCGCG CGACGCTGTC GAAGGCCGAT
GCGCGTCGGC AATTCGGGCT GAAGCCGGAT GCGATCATTC TCGGCTCGGC CGCGCGGCTG
CATCCGCTGA AGCAGCTCGA CGCCGCGATC CGCGTTCTGG CGAACCGGCC GGACTGGACC
GTCGCGCTCG CCGGCCAGGG CCAGGACGAA CCGCGACTCC GCGAGCTCGC CGATCGGCTG
GGCGTGTCCG ATCGCGTGCA ATTCATCGGA GAGATCTCTC CGGAGCAGGT CGCGAACTTC
CTCGCCTGCC TCGACGTCTT CGTGTTTCCT TCACTCGCCG AAACCTTCGG TCTCGCCGCG
GTCGAGGCTG CAAATGCCGG CGTGCCGGTG ATCGCCAACG ATCTTCCGGT GCTGCGCGAG
GTGCTGTCGT ATCAGGGGGG CCCCGCAGCG GTCTTCGTCG ATGCGTCCGA CACCGCGGCA
ATGACCGCCG CGATCGCGCG CGTGCTCGCC GACGACGAAT TCGCCGCGCA GCTTCGTCGC
GCGGGTGATG GCCTGAAAAT GCGCTATTCG GTCGATGCGA TGGCGGACGA ATACGCCCGC
ATCATCGAGC AAGCGTTGGC GGAAAACGTC CAGCCAGGGG AGCGAACAGG TGATCGTTGA
|
|---|
| Protein sequence | MTILKKSQFE RVLALESGTS AQTATPPRDA GVTDRTARSA KRARVLLIQT QAENAGAQEI
SRLVGAGLAA RGYDVHNLFF FRQSLAFDEP PQTVYCAPHR PGDPLSFLRF LGALYARIRQ
LRPDVVLTFQ HYGNSIGGIV SRLASPAPVI ANQVSARLTM PGWLSGVDRL MGQLGVFDSI
TVNSHDMLRD YSRYPESYRK RLTHVPHGFD QKRATLSKAD ARRQFGLKPD AIILGSAARL
HPLKQLDAAI RVLANRPDWT VALAGQGQDE PRLRELADRL GVSDRVQFIG EISPEQVANF
LACLDVFVFP SLAETFGLAA VEAANAGVPV IANDLPVLRE VLSYQGGPAA VFVDASDTAA
MTAAIARVLA DDEFAAQLRR AGDGLKMRYS VDAMADEYAR IIEQALAENV QPGERTGDR
|
|---|
| |