Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1085 |
Symbol | |
ID | 4021561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1235029 |
End bp | 1236252 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637961277 |
Product | aminotransferase, class V |
Protein accession | YP_568224 |
Protein GI | 91975565 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGA CCCGCGTCCC GCCGCAGCCG GCGAATATCT GCTATCTCGA CGCCAACGCC ACCACGCGCA CCGATCCGCG GGTGGTTGAT GCGATGCTAC CGTTCTTCTC CGGCTATTTC GGCAATCCGT CGTCGAAGCA CGCGCTCGGC GCCCACGCCG CGATGGCGGT GAGGCGTGCG CGCGAGCAAT TGCAGGCGCT GCTCGGCGCT GCGCATCCGC ACGAACTGAT CTTCACCTCG GGCGGCACTG AAAGCGCCAA TGCGGCGATC CTGTCGGCGC TGGAAGTAGC ACCCCGGCGG CGCGAGATCA TCACCACCGC GGTCGAACAC CCCGCCGTTC TGTCGCTGTG CGCCTGGCTC GAGAAGACCA AGGGCATCCG CGTCCACGTC ATCCCGGTCG ATCGTCACGG CCACCTCGAC ATCGCCGCCT ATCGCGAGGC GCTGTCGGAT CGCGTCGCGT TGGTCTCGAT GATGTGGGCG AATAACGAGA CCGGCGTGAT CGCACCGGTC GCCGATCTCG CCGAGCTTGC GAAGGATGTC GGAGCGCTGT TTCACACCGA TGCGGTGCAG GCGGTCGGCA AATGTCCGAT CGACCTGCAA TCCACCGCGA TCGACATGCT GTCGCTGTCC GGACACAAGT TGCATGGGCC GAAGGGCATC GGCGCGCTGT ATGTCCGCAC TGGCGTCGGC TTCAAGCCGC AGATCAAGGG TGGCCAGCAC GAGCGCGGCC GCCGCGCCGG CACCGAGAAC GTACCGGGCA TCGTCGGCCT CGGCATGGCC GCAGAACTCG CCGCCGAAGC AATGGCCGAT GAGGACATCC GGGTGCGAGG CTTGCGCGAC CGGCTGGAGC GCGGGGTCCT CGCGCAGGTC GACCATTGCG TGGCGATCGG CGCCCGGGCC GAGCGGCTGC CCAACACGTC GAACATCGCG TTCTCCTTCA TCGACAGCGA GGCCATCGTC ACGCTGCTCG ACCGCGCCGG CATTGCCGCC TCGATGGGTT CGGCTTGTTC GACCGGCTCG TTCGAGCCAT CGCATGTGCT GATGGCCATG AAAATCGCGG AGGACACCGT CCGCGGCGGC GTGCGGTTCT CACTGTCGCG CGACAACACC GACGACGACG TCGATCGGGC GCTCGCCGTG ATCCCGGGCG TGGTCGCGAA GCTGCGCGCA ATCTCGCCGT TCGATGCCGA TGCAGGACCA TTGCTCGGGC ATTCCCATGC TTGA
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Protein sequence | MNQTRVPPQP ANICYLDANA TTRTDPRVVD AMLPFFSGYF GNPSSKHALG AHAAMAVRRA REQLQALLGA AHPHELIFTS GGTESANAAI LSALEVAPRR REIITTAVEH PAVLSLCAWL EKTKGIRVHV IPVDRHGHLD IAAYREALSD RVALVSMMWA NNETGVIAPV ADLAELAKDV GALFHTDAVQ AVGKCPIDLQ STAIDMLSLS GHKLHGPKGI GALYVRTGVG FKPQIKGGQH ERGRRAGTEN VPGIVGLGMA AELAAEAMAD EDIRVRGLRD RLERGVLAQV DHCVAIGARA ERLPNTSNIA FSFIDSEAIV TLLDRAGIAA SMGSACSTGS FEPSHVLMAM KIAEDTVRGG VRFSLSRDNT DDDVDRALAV IPGVVAKLRA ISPFDADAGP LLGHSHA
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