Gene RPD_1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1082 
Symbol 
ID4021558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1232570 
End bp1233277 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content66% 
IMG OID637961274 
ProductNifQ 
Protein accessionYP_568221 
Protein GI91975562 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCG CGGCGAAACA GGATCGCGGA GGCGCGTTGC AGGCGGAGCC GCTGCGCGTG 
GCGGCATGCG GCTTTGCGTC TTCGCCGGCG ATCGTGTATC GCGCGCTCAC CGGCTGCGCG
CCGGCGGAAG CGCAGATCGA CGACGACCGC GCCTTCGATC GCCATGTGCT GGCCTCGATC
CTGTCGGCGG CGATCAGCGA ACCCGGTCCG ATCAATGAGC GCTGTGGAAT CGGCACCGAC
GACTTCGTCG CGTTGGTAAC CGCCTTCTTC CCGCACGTCT CGGTGTTGCT GTCCGTCCTC
GCCGCCGGCG AGCCGGACGA CGACGAAGAA TCGGCCATGG TGCGCGACCT GCTGCTCGCT
CATCGTTCGA CGTCAGGCGA TGTCGGGCGC TGGCTGGCCA CGATGGTGGC GCGCAGGGCG
ATGGAGCCGG ATCACCTGTG GGAGGATCTT GGGTTGCGCA ATCGCACTGA ACTGTCGCGG
CTCTTGCTGC GGCATTTCGA ACCGCTTGCG CGCGACAATA CCCGCAACAT GCGCTGGAAG
CGGTTCTTCT ATCGCAAGCT CTGCGAGAAT GACGGCGTGG TCATGTGCAG TACACCGGTC
TGCTCGCAAT GCAATGATTT CGCCGAATGC TTCGGCGACG AGAGCGGCGA GAGTCGGATG
GCGGCTCGCC GCCGTGCCCT GGAACTGAGT GCGGCGCGCG TGTCCTGA
 
Protein sequence
MIVAAKQDRG GALQAEPLRV AACGFASSPA IVYRALTGCA PAEAQIDDDR AFDRHVLASI 
LSAAISEPGP INERCGIGTD DFVALVTAFF PHVSVLLSVL AAGEPDDDEE SAMVRDLLLA
HRSTSGDVGR WLATMVARRA MEPDHLWEDL GLRNRTELSR LLLRHFEPLA RDNTRNMRWK
RFFYRKLCEN DGVVMCSTPV CSQCNDFAEC FGDESGESRM AARRRALELS AARVS