Gene RPD_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1078 
Symbol 
ID4021554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1231064 
End bp1231462 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content64% 
IMG OID637961270 
Productdinitrogenase iron-molybdenum cofactor biosynthesis 
Protein accessionYP_568217 
Protein GI91975558 
COG category 
COG ID 
TIGRFAM ID[TIGR02663] nitrogen fixation protein NifX 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCG CATTCGCCAC CCAGGATCTG AAGCGCGTCG ACGCGCATTT CGGCTGGGCG 
AGGAACATCG CCATCTACGA AGTCACCGCG GAGGATTATC GCTTCATTGA GGCGGTGCAG
TTCGCCGAGG AGAAGGAAGA CGGTAACGAA GACAAGTTGG CGGCGAAGAT CGATGCGATC
CGGGATTGCG CGATCGTGTA TTGCGCGGCG ATCGGCGGCT CCGGCGCGGC GCGCGTGGTC
GCCGCGCAGG TGCACCCGCT GAAGCTCGCA CAGCCGGAGC CGATCACCGA ACTGATCGTC
AAGTTGCAAG GCGTGCTGCG CGGCGCGCCG CCGCCGTGGC TGCGCAAGGC GCTGTTGAAA
GGCGAAGAGC GCAAGTTCGA TTTCGCGGAT GAGGTGTGA
 
Protein sequence
MKVAFATQDL KRVDAHFGWA RNIAIYEVTA EDYRFIEAVQ FAEEKEDGNE DKLAAKIDAI 
RDCAIVYCAA IGGSGAARVV AAQVHPLKLA QPEPITELIV KLQGVLRGAP PPWLRKALLK
GEERKFDFAD EV