Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1073 |
Symbol | nifH |
ID | 4021549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1224040 |
End bp | 1224939 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637961265 |
Product | nitrogenase reductase |
Protein accession | YP_568212 |
Protein GI | 91975553 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCAC TTCGGCAAAT CGCATTTTAC GGCAAGGGCG GCATCGGCAA GTCGACCACC TCGCAGAACA CCCTCGCGGC GCTGGTCGAG CTGGGTCAGA AGATCCTGAT CGTCGGCTGC GACCCCAAGG CGGACTCCAC CCGCCTGATC CTCAACACCA AGATGCAGGA CACCGTGCTC AGCCTCGCTG CTGAAGCGGG TTCGGTCGAG GATCTCGAAC TCGAAGACGT GATGAAGATC GGCTACAAGG GCATCAAGTG CACCGAAGCC GGTGGTCCCG AGCCGGGCGT CGGCTGCGCC GGCCGCGGCG TCATCACCGC GATCAACTTC CTCGAAGAGA ACGGCGCCTA TGAAGACGTC GACTACGTCT CCTATGACGT GCTCGGGGAC GTGGTCTGCG GCGGCTTCGC GATGCCGATC CGCGAGAACA AGGCCCAGGA AATCTACATC GTGATGTCCG GCGAGATGAT GGCGCTGTAT GCCGCCAACA ACATCGCCAA GGGCATTCTG AAATACGCCT CCTCGGGCGG CGTCCGCCTC GGCGGCCTGA TCTGCAACGA GCGCCAGACC GACCGCGAGC TCGACCTCGC CGAAGCGCTG GCTGCCCGGC TGAACTCCAA GCTGATCCAC TTCGTGCCGC GCGCCAACAT CGTGCAGCAT GCCGAGCTGC GCCGCCAGAC CGTGATCGAA TACGCGCCCG ACTCCCAGCA GGCGCAGGAA TATCGGCAGC TCGCCAACAA GATCCACGCC AATTCCGGCA ACGGCACCAT CCCGACCCCG ATCACCATGG AAGAGCTGGA AGGCATGCTG CTCGACTTCG GCATCATGAA GACCGACGAG CAGGCGCTCG CCGAACTCGC CGAGAAGGAA GCCGCCAAGG CGGCGGCCGC CACCGCTTGA
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Protein sequence | MAALRQIAFY GKGGIGKSTT SQNTLAALVE LGQKILIVGC DPKADSTRLI LNTKMQDTVL SLAAEAGSVE DLELEDVMKI GYKGIKCTEA GGPEPGVGCA GRGVITAINF LEENGAYEDV DYVSYDVLGD VVCGGFAMPI RENKAQEIYI VMSGEMMALY AANNIAKGIL KYASSGGVRL GGLICNERQT DRELDLAEAL AARLNSKLIH FVPRANIVQH AELRRQTVIE YAPDSQQAQE YRQLANKIHA NSGNGTIPTP ITMEELEGML LDFGIMKTDE QALAELAEKE AAKAAAATA
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