Gene RPD_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1053 
Symbol 
ID4021529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1207471 
End bp1208556 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content64% 
IMG OID637961245 
Productfructose-1,6-bisphosphate aldolase 
Protein accessionYP_568192 
Protein GI91975533 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR00167] ketose-bisphosphate aldolases
[TIGR01521] fructose-bisphosphate aldolase, class II, Calvin cycle subtype 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.540808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGTA TCACCTTGAG GCAGTTGCTG GATCACGCCG CGGAGCACGG CTACGGCGTG 
CCGGCATTCA ACATCAACAA CATGGAGCAG GGGCTCGCGA TCATGGAAGC GGCGGCCGCG
GTCGACGCGC CCGTCATCAT CCAGGCCTCG CGCGGCGCGC GCTCCTACGC CAACGACATC
ATGCTGGCGA AGATGATCGA TGCGCTGGCG GAAATGTATC CCGACATCCC GCTGTGTATG
CATCAGGACC ACGGCAACGA CGAAGCCACC TGCGCCACCG CGATCAAATA CGGCTTCACC
TCGGTGATGA TGGACGGCTC GCTCAAGGCC GACGCCAAGA CCGCCGCGGA CTATGAGTAC
AATGTCGACA TCACCCGCCG CGTCACCGAC ATGGCGCATT GGGTCGGCGC CTCGGTGGAA
GGCGAGCTCG GCGTGCTTGG TTCGCTCGAG CATGGCGGCG GCGAGCAGGA AGACGGCCAC
GGCGTCGAGG GCAAGGTCAG CCGCGAGCAA CTGCTCACCG ATCCGGATCA GGCGGTGGAT
TTCGTCCGCG CCACCAAGGT CGACGCATTG GCGATCGCGA TGGGCACCTC GCACGGCGCC
TACAAGTTCA CCCGCAAGCC CGACGGCGAT GTTCTCGCCA TGAAGGTGGT CGAGGAGATT
CATCGCCGGC TGCCGAACAC CCATCTGGTG ATGCACGGCT CGTCCTCGGT GCCGCAGGAA
CTGCAGGACA TCTTCAACGA GTTCGGTGGC GCGATGCCGC AGACCTTCGG CGTTCCGGTC
GAAGAGATCG TGCGCGGCAT CAAGCACGGC GTGCGCAAGG TCAACATCGA CACCGATTGC
CGCCTGGCGA TGACCGGCGT GTTCCGCAAG ATCGCGACCC AGAACAAAGC GGAGTTCGAT
CCGCGCAAGT TCCTGAAGCC GGCGATGGAT GCGATGCGCG ACATCTGCCG TCTTCGCTTC
GAGCAGTTCG GGACCGCGGG CAATGCCAGC AAGATCAAGG TGATCCCGCT CGCGGAGATG
GCCAAGCGCT ACAAGTCCGG TGCGCTCGAC CCGCAGATCG GTCAGGTCGC GAAGGCCGCG
GAATAA
 
Protein sequence
MARITLRQLL DHAAEHGYGV PAFNINNMEQ GLAIMEAAAA VDAPVIIQAS RGARSYANDI 
MLAKMIDALA EMYPDIPLCM HQDHGNDEAT CATAIKYGFT SVMMDGSLKA DAKTAADYEY
NVDITRRVTD MAHWVGASVE GELGVLGSLE HGGGEQEDGH GVEGKVSREQ LLTDPDQAVD
FVRATKVDAL AIAMGTSHGA YKFTRKPDGD VLAMKVVEEI HRRLPNTHLV MHGSSSVPQE
LQDIFNEFGG AMPQTFGVPV EEIVRGIKHG VRKVNIDTDC RLAMTGVFRK IATQNKAEFD
PRKFLKPAMD AMRDICRLRF EQFGTAGNAS KIKVIPLAEM AKRYKSGALD PQIGQVAKAA
E