Gene RPD_1051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1051 
Symbol 
ID4021527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1204488 
End bp1205363 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content61% 
IMG OID637961243 
Productphosphoribulokinase 
Protein accessionYP_568190 
Protein GI91975531 
COG category[C] Energy production and conversion 
COG ID[COG3954] Phosphoribulokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.382948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGTA AGCACCCGAT CATCTCCATC ACCGGCTCCT CCGGCGCCGG CACGACATCC 
GTCAAGCGCA CCTTCGAGCA GATCTTCCGC CGCGAGAACG TCAACGCGGC CTATATCGAG
GGCGACGCGT TCCATCGCTA CAACCGCGTC GATATGCGGA CCAAGATGGC CGAGGAGGCC
GAGCGCGGAA ACAAGCACTT CAGCCATTTC AGTCCCGAGA CCAATCTGTT CGAGGAGCTG
GAGACCACCT TCCGGGACTA CGCCGCGACC GGCACCGGCA AGACCCGCTA CTACGTGCAC
GACGACAAGG AAGCCTTGGT TCACGGCGTG CCGCCGGGCA ATTTCACCGA GTGGCAGTCG
CTGCCGTCGG ATTCCGATCT GCTGTTCTAT GAAGGCCTGC ACGGCGCTGT GATGACCGAC
ACGGTCAACG TCGCCCAGCA CGCCGACCTC AAGATCGGCG TGGTGCCCGT GATCAATCTG
GAGTGGATCC AGAAGCTGCA CCGCGACCGC GCCGACCGCG GTTATTCGAC CGAGGCCGTC
ACCGACACCA TTCTGCGCCG GATGCCCGAC TATGTGCACT ACATCGTGCC GCAGTTCGGC
GAGACCGACA TAAACTTCCA GCGTGTGCCG ACGGTCGACA CCTCGAACCC GTTCATCGCG
CGCTGGATTC CGACGCCCGA CGAGTCGATG GTGGTGATCC GGTTCAAGGA CCCGCGTGGC
ATCGACTTCG CTTATCTGCT GTCGATGATC CAGGGCAGTT TCATGTCGCG CGCCAACTCG
ATCGTGATTC ACGGTGCCAA GATGGATATT GCGATGCAGC TGATCCTGAC GCCGTTGATC
ATGCAGCTGA TCGAACGCAA GCGCGGCGTG AAGTAA
 
Protein sequence
MSRKHPIISI TGSSGAGTTS VKRTFEQIFR RENVNAAYIE GDAFHRYNRV DMRTKMAEEA 
ERGNKHFSHF SPETNLFEEL ETTFRDYAAT GTGKTRYYVH DDKEALVHGV PPGNFTEWQS
LPSDSDLLFY EGLHGAVMTD TVNVAQHADL KIGVVPVINL EWIQKLHRDR ADRGYSTEAV
TDTILRRMPD YVHYIVPQFG ETDINFQRVP TVDTSNPFIA RWIPTPDESM VVIRFKDPRG
IDFAYLLSMI QGSFMSRANS IVIHGAKMDI AMQLILTPLI MQLIERKRGV K