Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1051 |
Symbol | |
ID | 4021527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1204488 |
End bp | 1205363 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637961243 |
Product | phosphoribulokinase |
Protein accession | YP_568190 |
Protein GI | 91975531 |
COG category | [C] Energy production and conversion |
COG ID | [COG3954] Phosphoribulokinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.382948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGTA AGCACCCGAT CATCTCCATC ACCGGCTCCT CCGGCGCCGG CACGACATCC GTCAAGCGCA CCTTCGAGCA GATCTTCCGC CGCGAGAACG TCAACGCGGC CTATATCGAG GGCGACGCGT TCCATCGCTA CAACCGCGTC GATATGCGGA CCAAGATGGC CGAGGAGGCC GAGCGCGGAA ACAAGCACTT CAGCCATTTC AGTCCCGAGA CCAATCTGTT CGAGGAGCTG GAGACCACCT TCCGGGACTA CGCCGCGACC GGCACCGGCA AGACCCGCTA CTACGTGCAC GACGACAAGG AAGCCTTGGT TCACGGCGTG CCGCCGGGCA ATTTCACCGA GTGGCAGTCG CTGCCGTCGG ATTCCGATCT GCTGTTCTAT GAAGGCCTGC ACGGCGCTGT GATGACCGAC ACGGTCAACG TCGCCCAGCA CGCCGACCTC AAGATCGGCG TGGTGCCCGT GATCAATCTG GAGTGGATCC AGAAGCTGCA CCGCGACCGC GCCGACCGCG GTTATTCGAC CGAGGCCGTC ACCGACACCA TTCTGCGCCG GATGCCCGAC TATGTGCACT ACATCGTGCC GCAGTTCGGC GAGACCGACA TAAACTTCCA GCGTGTGCCG ACGGTCGACA CCTCGAACCC GTTCATCGCG CGCTGGATTC CGACGCCCGA CGAGTCGATG GTGGTGATCC GGTTCAAGGA CCCGCGTGGC ATCGACTTCG CTTATCTGCT GTCGATGATC CAGGGCAGTT TCATGTCGCG CGCCAACTCG ATCGTGATTC ACGGTGCCAA GATGGATATT GCGATGCAGC TGATCCTGAC GCCGTTGATC ATGCAGCTGA TCGAACGCAA GCGCGGCGTG AAGTAA
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Protein sequence | MSRKHPIISI TGSSGAGTTS VKRTFEQIFR RENVNAAYIE GDAFHRYNRV DMRTKMAEEA ERGNKHFSHF SPETNLFEEL ETTFRDYAAT GTGKTRYYVH DDKEALVHGV PPGNFTEWQS LPSDSDLLFY EGLHGAVMTD TVNVAQHADL KIGVVPVINL EWIQKLHRDR ADRGYSTEAV TDTILRRMPD YVHYIVPQFG ETDINFQRVP TVDTSNPFIA RWIPTPDESM VVIRFKDPRG IDFAYLLSMI QGSFMSRANS IVIHGAKMDI AMQLILTPLI MQLIERKRGV K
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