| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1028 |
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| Symbol | |
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| ID | 4021503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1170038 |
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| End bp | 1171522 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637961219 |
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| Product | Alpha,alpha-trehalose-phosphate synthase |
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| Protein accession | YP_568167 |
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| Protein GI | 91975508 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.499004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCTAG TTGTCGTTTC TAACCGGGTG GCGAGGGCCT CGGCAAATGA GCCGATGACG
GGCGGTTTAG CCGCCGCTCT GCTTCCGGTG GTGGAGAAAT CCGGTGCAAT CTGGGTGGGC
TCCAGCGGCC GCGTGCGCGA TGGCGCACAA CGGGAACCTT TCGCCGAAAT CGAACAGCTC
GGTTCCGGCG CACTTGCGAT GCTGGATCTG CCCGCGGCGC ATTATGGCGG TTACTATGAA
GGCTTCGCCA ATTCCGCGCT GTGGCCGGCG CTGCATTCCC GCGCCGATCT GATCCGCGTC
TCGCAGGACG ACTATCACTC CTATCGCGAA GTCAACGGCT TCATGGCGCG CGCCTTGATG
CGGTTCCTCA AGCCGGACAC CGCGTTCTGG ATTCAGGATT ACCACTTTCT TGCGCTCGGC
GCGGAATTGC GCGCGCTCGG CGTGACCCAG CCGATCGGCT TCTTTCTGCA CACGCCATGG
GCGTCGCCGG CGACGATGGG CTGTGTGCCG CATAATCGCG ACCTGATCGA AGCGATGCTG
GCTTATGACC TGATCGGTTT CCAGACCGAG GAGGACAGGT CAAACTTCCT GTCCTATGTC
AAAGCCGAAC TCGGCTTCGT CGTCACCGAC GGCGTCGTCA CGACTGCGCG CGGCATCGCG
CGATGCGAAG TGTTTCCGAT CGGCATCGAC GCCGATCTTT TTGCGCAACA GGCGCAAAAG
GCGACAGCGC ATCCCGATGT CTCCCGGCTG CGCAAAAGCC TCAACGGCGA GAAGCTGGTG
ATCGGCGTCG ACCGGCTGGA TTATTCCAAG GGCCTGATCA ACCGCATCAA TGCGTTCGAT
CGTCTGCTGA CGACGCGGCC GTCCTGGCAG CGAACCGTTT CGCTGCTGCA GATCGCAACG
CCGTCGCGCG GCGCGATCGA GGCCTATGGC AATCTGCAGG GCGAACTCGC CAGGCTCGTC
AGCGACGTCA ACGGCCGGCT CGGCGAGGCC GACTGGACGC CGATCCGCTA TCTCAACAAG
GGTTTTCGCC AGGGCGTGCT GGCGGGGCTG TATCGGACCG CGCAGGTCGG CCTGGTGACG
CCGCTGCAGG ACGGCATGAA TCTGGTGGCG AAGGAATATG TCGCCGCGCA GAACCCGATC
GATCCGGGCG TGCTGGTGCT GTCGAAATTC GCCGGCGCGG CTCAGGAGCT CGACACCGCG
CTGCTGGTCA ATCCGCACGA TGTCGAAGGG ATGGCGCGGG CGATCGACAC CGCGCTGTCG
ATGCCGGTGA CCGAGCGGCG ACTGCGCTGG GAGGCGATGA TGGCCAAGCT GCGGCGCGGC
AGCGTGCAAG CCTGGTTCTC GGATTTCGTG ACGTCGCTGG AAAGCGCCAA TGACGCCAAC
AGCGAGGCCG TCGGCGCGAT CGCCAGCACA GCGCCGGCGC TGAAGATGGC CGGCGGCTGG
TCGCGACGCT CGCCGGTGGC GTTCAGCGGA GCGATCCTGC GATAG
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| Protein sequence | MNLVVVSNRV ARASANEPMT GGLAAALLPV VEKSGAIWVG SSGRVRDGAQ REPFAEIEQL
GSGALAMLDL PAAHYGGYYE GFANSALWPA LHSRADLIRV SQDDYHSYRE VNGFMARALM
RFLKPDTAFW IQDYHFLALG AELRALGVTQ PIGFFLHTPW ASPATMGCVP HNRDLIEAML
AYDLIGFQTE EDRSNFLSYV KAELGFVVTD GVVTTARGIA RCEVFPIGID ADLFAQQAQK
ATAHPDVSRL RKSLNGEKLV IGVDRLDYSK GLINRINAFD RLLTTRPSWQ RTVSLLQIAT
PSRGAIEAYG NLQGELARLV SDVNGRLGEA DWTPIRYLNK GFRQGVLAGL YRTAQVGLVT
PLQDGMNLVA KEYVAAQNPI DPGVLVLSKF AGAAQELDTA LLVNPHDVEG MARAIDTALS
MPVTERRLRW EAMMAKLRRG SVQAWFSDFV TSLESANDAN SEAVGAIAST APALKMAGGW
SRRSPVAFSG AILR
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