Gene RPD_0995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0995 
Symbol 
ID4021470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1123124 
End bp1125094 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content66% 
IMG OID637961186 
Productchemotaxis sensory transducer 
Protein accessionYP_568134 
Protein GI91975475 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.880627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTCC GCCTTCGCCT CGGCCACAAG ATCAATTCCA TCGCCGCAGT CGGCATCGCC 
GGCGTTCTCG CCCTCGGCGC ATTGTTCGTG CTGGGTAACG CCTCGCAGGA CGCGGCGCGG
AGCATCGACG AGCAGGCGCG AGACCTCGGC CGCAGCAACG ACAGGCTGTT CGTCACCTTT
CTCGAGCAAC GCCGCACCGA AAAGGACTTC CTGCTGCGCA AGGACGACAA ATACATCAAG
CAGCATCAAC AGCTCAGCAC CACTGCGATT CGCTACCTCG ACGAACTCGC GCGGCAGAGC
CGAGCCTTGG GCCGCACCGA CCTTACCGAC AGCCTGAAAG CCATCCAGTC CGGCTACAGC
GACTACACGC GGCATTTCGC GGCACTGACG GCGGCGCGGA TCCGGCTCGG GCTGAAGGAA
GATCTGGGCG TCGAGGGCAG CCTACGCAAT TCGGTGCGGG CGATCGAAAC GGCGCTGAAG
AACTTCGACG CGCCGAAGCT GACGATCACC ATGCTGATGA TGCGGCGGCA CGAGAAGGAT
TTCATGCTGC GAGGCAATCC GACCTACGGC GACGACATGA AGAAGCGCGC CGCGGAGTTT
TCGCAGCAAC TGGCGGCAGC CGACCTGCCC GAGTCCGCAA AGGCCGAACT CGGCCGGAAG
CTCGCGGACT ATCAGCGCGA CTTCATCGCC TGGATGGAGA CCGCGCTTTC GTTCGAACAG
GAACAGAAGG CGGCCTCGGC CGCCTTCGCC GCGATCGAAC CGGTGATCGG CGAGGTCGCG
AAATCTGTCG AACGACTGGT TCAGGAGGCG CAGGACGCCA ACACCGTGGC GCGCGAGACC
ACCACGAAGA CTCTCGAGAT CGCGATCGCA CTGATCATTC TCAGCGTCGG CCTGCTCGGC
CTCCTGATCG GCCGTTCGGT GTCCCGTCCG CTGAAGGGCC TGACCTCCGG GCTGAAGGAA
CTCGGGGCCG GCAATTTCAA TGTCGTGCTG CCCGGGCTCG ATCGTCACGA CGAGATCGGC
GACATGGCGC GAGCCGTGGA ATCGTTCAAG GTAGTGGCGG AGGAAAAAGC CCGCGCCGAA
GCCGAGGCCA AGGCGCAGCA GGACCGCATC GCCTCAGAGC AGCGCAGGCG CGACATGCAC
AGGCTCGCCG ATCATTTCGA GGAAGCCGTC GGCGAGATCG TCGAGACCGT CTCGTCGGCC
TCGACCGAGC TGGAAGCATC GGCGACGACG CTGACGTCCA CAGCGCAGCG AGCGCAGCAG
TTCACCGCGC GCGTCGCGGA GGCGTCGGAG GAGGCCTCGA CCAACGTCGA GTCGGTGGCG
TCCGCGAGCG AGGAGATGGC GTCGTCGGTC AACGAGATCA GCCGCCAGGT GCAGGAATCC
GCGCGGATCG CCAGCGAAGC GGTGACGCAG GCGCAGGAGA CCAATGATCG CGTCAGCAAT
CTGTCGGAGG CCGCGGCGCG GATCGGTGAC GTCGTCGATC TGATCAACAC CATCGCCTCG
CAGACCAACC TGCTGGCGCT GAATGCGACC ATCGAGGCGG CGCGCGCCGG CGACGCCGGG
CGCGGCTTCG CCGTGGTGGC GAGCGAGGTC AAGGCACTGG CCGAGCAGAC CGCGAAGGCG
ACCGAACAGA TCAGCCAGCA GGTCGGCGGC ATCCAGTCCG CGACCGGCCA GTCGGTGGCG
TCGATCCGCG AGATCAGCGG CACGATCGCG CGGATGTCGG AGATCGCCGC GACGATCGCC
TCTGCGGTCG AGGAGCAAGG CGCCGCGACC CAGGAAATCT CGCGCAACGT TCACCAGGCC
GCCGCAGGCA CGCAGCAGGT CTCGGCCAAC ATCGTCGAAG TGCAGCGCGG CGCGAGCGAG
ACCGGTTCGG CGTCTGCGCA GGTGCTGACG GCGGCGCAGT TGCTGGCGCA CGACAGCACC
CGCCTGAAGG ACGAAGTCAG CCAGTTCCTG CGCACGGTTC GCGCGGGTTG A
 
Protein sequence
MPFRLRLGHK INSIAAVGIA GVLALGALFV LGNASQDAAR SIDEQARDLG RSNDRLFVTF 
LEQRRTEKDF LLRKDDKYIK QHQQLSTTAI RYLDELARQS RALGRTDLTD SLKAIQSGYS
DYTRHFAALT AARIRLGLKE DLGVEGSLRN SVRAIETALK NFDAPKLTIT MLMMRRHEKD
FMLRGNPTYG DDMKKRAAEF SQQLAAADLP ESAKAELGRK LADYQRDFIA WMETALSFEQ
EQKAASAAFA AIEPVIGEVA KSVERLVQEA QDANTVARET TTKTLEIAIA LIILSVGLLG
LLIGRSVSRP LKGLTSGLKE LGAGNFNVVL PGLDRHDEIG DMARAVESFK VVAEEKARAE
AEAKAQQDRI ASEQRRRDMH RLADHFEEAV GEIVETVSSA STELEASATT LTSTAQRAQQ
FTARVAEASE EASTNVESVA SASEEMASSV NEISRQVQES ARIASEAVTQ AQETNDRVSN
LSEAAARIGD VVDLINTIAS QTNLLALNAT IEAARAGDAG RGFAVVASEV KALAEQTAKA
TEQISQQVGG IQSATGQSVA SIREISGTIA RMSEIAATIA SAVEEQGAAT QEISRNVHQA
AAGTQQVSAN IVEVQRGASE TGSASAQVLT AAQLLAHDST RLKDEVSQFL RTVRAG