Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0994 |
Symbol | |
ID | 4021469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1120290 |
End bp | 1122260 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637961185 |
Product | chemotaxis sensory transducer |
Protein accession | YP_568133 |
Protein GI | 91975474 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.357708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTCC GCCTCCGCCT CAGCCACAAG ATCAACTCCA TCGCCGTCGT CGGCATCGCC GGCGTTCTCG CCCTGGGCGC GCTATTCACG TTCGGCAACG CGTCACAGGA CGCAGCGCGG ATCGAGGACG AACGTGCAAG GGCGCTCGGT GACAGCAACG CGAAGCTTCA GATCGCGATG CTGGAGCAGC GCCGCGCTGA AAAGAATTTC ATCATCCGCA AGGAAGAGAG CTACCTCCGC CAGTACCAGG ACAACGCCAA GGCGGCGAAG GCAATTCTCG CCGACATGAC CCAGCGCGCC GAAGCAGCCG GGCAGACGGA CCTGAGCGGC AAGATGAAGA CCATCCAGGC GGGCTACGAA GACTATGACC GCCATTTTGC GCAACTCGCC GACGCCCAGA TCAAGCTCGG CCTGAAAGAA GATCTCGGGC TGGAGGGCAA CATACGCACT TTGGCGAAAA CAATCGAGAC CGCGCTCAGC ACACTCGACG AACAGAAGCT GATGGTGACG ATGTTGATGA TACGGCGGCA CGAGAAGGAC TTCATGCTGC GCGGCAATCC GCAGTACCTC GACGACATGA AGAAGCGCAT CGAGGAATTC TCCGCGCAAC TCGCCGCCGC CGATCTTCCC ACCGCTTCGA AGACCGACAT CGGCCGGCAG CTCGCCGTCT ATCAACGCGA CTTCAAGGGA TGGATGGAAA CCGGGCAGGT CATGGTCCAG GAGGAAAAAA ACCTCGTGTC CCGCTTCCGC GCGATCGAGC CGGTGCTCCA AAGCGTCGGA GCGACTATCA ATCAGTCCGC GGAACAGGCG AAGGCTGCAG CCGCCGCGGC GCGCGAGACG ACGACGTCGC GGATGCAGAT CGCGATCGCG CTGATCATCC TCAGCGTCAG CCTGCTCGGC CTGTTGATCG GCCGTTCGGT GGCGCGCCCG CTGAAAGGCT TGACTTCCGG GCTCAGAGAA CTCGGCGCCG GCAATTTCGA CGTGGTACTG CCCGGCCTCG ACCGTCACGA CGAGATCGGC GACATGGCGC AGGCGGTGGA ATCCTTCAAA GTGATGGCGC AGGACAGGGC CCGTGCCGAG GCCGAGGCCA AGGCTCAGCA GGAACACCTC GCCGCCGAAC AGCGCAAGCG CGACATGAAC AAGCTGGCGG ATCAGTTCGA GGAGGCGGTC GGGGAGATCG TCGAGACCGT CTCGTCCGCC TCGACTGAAC TCGAAGCATC GGCGACGACG CTGACCGACA CAGCGCAGCA CGCGCAGCAG TTCACCACGC TCGTCGCAGC AGCGTCGGAG GAAGCCTCGA CCAATGTGGA GTCGGTGGCG TCCGCCAGCG AGGAGATGGC ATCGTCGGTC ACCGAGATCA GCCGCCAGGT GCAGGAGTCC GCGCGGATCG CCAGCGAAGC GGTGACGCAG GCGCAGGAGA CCAACGATCG CGTCAGCCAC CTGTCGGAGG CTGCCTCGCG GATCGGCGAC GTCGTTGATT TGATCAACAC CATCGCCTCC CAGACCAACC TTCTGGCGCT GAATGCGACC ATCGAGGCTG CGCGCGCCGG CGACGCCGGG CGCGGCTTCG CTGTGGTGGC GAGCGAGGTC AAGGCGCTGG CTGAGCAGAC CGCGAAGGCG ACCGAACAGA TCAGCCAGCA GGTCGGCGGC ATCCAGTCCG CGACCGGCCA GTCGGTGGCG TCGATCCGCG AGATCAGCGG CACGATTGCG CGGATGTCGG AGATCGCCGC GACGATCGCC TCCGCGGTCG AGGAGCAGGG CGCCGCGACC AAGGAAATCT CACGCAACGT TCACCACGCA GCCGCCGGCA CCCATGAGGT TTCGGTCAAC ATCGTCGAAG TGCAGCGCGG CGCGAGCGAG ACCGGTTCGG CGTCTGCGCA GGTGCTGACG GCGGCGCATT CGCTGGCCCA CGACAGCGCA CGCCTGAAGG ACGAAGTCAG CCGCTTCCTG CGCACGGTGC GCGCCAGTTG A
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Protein sequence | MPFRLRLSHK INSIAVVGIA GVLALGALFT FGNASQDAAR IEDERARALG DSNAKLQIAM LEQRRAEKNF IIRKEESYLR QYQDNAKAAK AILADMTQRA EAAGQTDLSG KMKTIQAGYE DYDRHFAQLA DAQIKLGLKE DLGLEGNIRT LAKTIETALS TLDEQKLMVT MLMIRRHEKD FMLRGNPQYL DDMKKRIEEF SAQLAAADLP TASKTDIGRQ LAVYQRDFKG WMETGQVMVQ EEKNLVSRFR AIEPVLQSVG ATINQSAEQA KAAAAAARET TTSRMQIAIA LIILSVSLLG LLIGRSVARP LKGLTSGLRE LGAGNFDVVL PGLDRHDEIG DMAQAVESFK VMAQDRARAE AEAKAQQEHL AAEQRKRDMN KLADQFEEAV GEIVETVSSA STELEASATT LTDTAQHAQQ FTTLVAAASE EASTNVESVA SASEEMASSV TEISRQVQES ARIASEAVTQ AQETNDRVSH LSEAASRIGD VVDLINTIAS QTNLLALNAT IEAARAGDAG RGFAVVASEV KALAEQTAKA TEQISQQVGG IQSATGQSVA SIREISGTIA RMSEIAATIA SAVEEQGAAT KEISRNVHHA AAGTHEVSVN IVEVQRGASE TGSASAQVLT AAHSLAHDSA RLKDEVSRFL RTVRAS
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