Gene RPD_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0977 
Symbol 
ID4021452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1107234 
End bp1107872 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content72% 
IMG OID637961168 
Producthypothetical protein 
Protein accessionYP_568116 
Protein GI91975457 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00655382 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCTC CGATCCGCCC CTGCTTCAGG AGACGATATT TCGGCCTGAC CGCGGTCGCG 
GTCTTAACGG CGCTTGCGAC CGGATCGGCC GGCGCGCAGA CCGCCGCTCC GCCACCCGGC
GCACCACAGC CGCAGCCTGC CGCGGCCCCA CGGGAGAATC CGGGCCTCGT CAACGAAATC
GGCAGGCTGC TGAAGGACCC GTCGTCGCTG CTGCCCGACT TCGTCAAGCC GGATAGCAGC
GCCGACAAGA CGCCTGACCC CGCCCCGCCG CCGCCCGTGG CGCCCCAGCA ACCCGCCGCA
GCAGTACAGC CAGCGCCGCC GCCGGCCTCT GCGCCGCCGC CCAAGCAGCC CGCCGCAATC
GCGCCTGCGC CACCACCGCC TCCAGCCCCA TCGCAGGCTT CACCGATGAT CCCGGCCATC
ATCAACGGCC GCGAGATCTG TCCGGCGTCC GCCAATGGCG GGGCCGACTG TGCCGCCGGG
GCCGCCGTCC TGTGCCGAAG CAGGGGGTAT CAGAGCGGCC GCAGCCTCGC CGTCGACGCC
ACCGAAAAGT GCTCGGCCAA GCTGCTGATC CCCGGTCGCG CCCGCGAACC AGGCGACTGC
CGTACGGAAA ATTTCGTGAC GCGGGCTTGG TGCCAGTAG
 
Protein sequence
MAAPIRPCFR RRYFGLTAVA VLTALATGSA GAQTAAPPPG APQPQPAAAP RENPGLVNEI 
GRLLKDPSSL LPDFVKPDSS ADKTPDPAPP PPVAPQQPAA AVQPAPPPAS APPPKQPAAI
APAPPPPPAP SQASPMIPAI INGREICPAS ANGGADCAAG AAVLCRSRGY QSGRSLAVDA
TEKCSAKLLI PGRAREPGDC RTENFVTRAW CQ