Gene RPD_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0962 
Symbol 
ID4021437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1089503 
End bp1090294 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content68% 
IMG OID637961153 
Productmolybdate transport repressor 
Protein accessionYP_568101 
Protein GI91975442 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG2005] N-terminal domain of molybdenum-binding protein
[COG3585] Molybdopterin-binding protein 
TIGRFAM ID[TIGR00637] ModE molybdate transport repressor domain
[TIGR00638] molybdenum-pterin binding domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATAG AGGCCACGGT CACCTTAACG CGGAAGGACA TTTCCGGCGT CGGCCGAGAT 
CGCATCCGGC TGCTGCAGGC GGTGGCGCGC GAAGGCAGCA TCACCGCCGG CGCGAAAGCG
GCGGGCCTCA GCTACAAGGC GGCCTGGGAT GCGCTCGACG CGATGACCAA CGTGTTCGGG
CGGCCGCTGC TGGAAACCAG GACCGGCGGC AAGGCCGGCG GCGGCGCGGT GCTGACGCCG
ACCGGTGTGC GCGTGATCGA GGCGTTCGGC CGGCTTGAAG CCGAGATGGC GCGGGTGTTC
CGCAGCCTCG AGCCGGACCT TGCCGGCACC GGCATTTCCC CGATCAACCT CGTCTCCGGA
TTCTTCATGA AAACCAGCGC CCGCAACGCC CTTCGCGGCG CGATCACCGA TATCAAGTCG
GACACGCTGA GCGCCGAAAT CGCGGTTGCG GTGTCGGCCG ACACCACGAT CTACGCGCTG
CTCACCAGCG AGAGCGTGCG CAGCCTCGGT CTGGTGGTCG GGCGCGACGT GATCGTGCTG
ATCAAGGCGC CGTTCGTGCT GATCTCGCCG GGCAGCGAGG CGCCGCTGGT GTCGGCGCGC
AATTGCGTGC GCGGCGTGGT CCGGCGCAGC GATGTCTCCG CGGTCAACGC CGAGATCGTG
CTCGATATCG GCGGTGGCAA GACGCTCGCC GCCTCGATCA CCGCGCGTAG CGCCGAAGAC
ATGAAGCTTT CCCCCGGCGA TCCGGCCTGC GCGTTGTTCG ACGCCGCGCA TGTCATCGTC
GCCATCGATT GA
 
Protein sequence
MPIEATVTLT RKDISGVGRD RIRLLQAVAR EGSITAGAKA AGLSYKAAWD ALDAMTNVFG 
RPLLETRTGG KAGGGAVLTP TGVRVIEAFG RLEAEMARVF RSLEPDLAGT GISPINLVSG
FFMKTSARNA LRGAITDIKS DTLSAEIAVA VSADTTIYAL LTSESVRSLG LVVGRDVIVL
IKAPFVLISP GSEAPLVSAR NCVRGVVRRS DVSAVNAEIV LDIGGGKTLA ASITARSAED
MKLSPGDPAC ALFDAAHVIV AID