Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0945 |
Symbol | |
ID | 4021420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1061855 |
End bp | 1062580 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637961136 |
Product | hypothetical protein |
Protein accession | YP_568084 |
Protein GI | 91975425 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.238786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCTGC CGACTGATCA GCAACCGACA CGAACCGCGC CCGGCAAGCC TGCGCGGCGG CCGGGACGGT TACGCGCGGT GATCGTCGCG ACGTTGGCCC TCGGCTTCGT CGCCACGGCC GCGGGATTTG TCGCGTTCCT GGCGCAGTTG CGCGGCGCCG AGCTGAAGCC GAACCGTACG GCCGATGGCA TCGTCGTGCT GACCGGCGGC TCGTCGCGGG TGTCGGATGC GGTCGAGCTG CTCGCCTCCG GCTATGGCAA GCGACTGTTA ATCTCCGGCG TGCATCGGAC CAATGGCGCC AGCGACATCT CGCGCTCGGT GCCGGACAGC AAGGACTGGC TGGATTGCTG CGTCGATCTC GATCGATCGG CGGTCAACAC CCGCAGCAAC GCCGCCGAAA CCCGGCGCTG GGCGCACGAG CGTGGCTTTC ATTCGCTGAT CGTCGTCACC TCGAATTACC ACATGCCGCG CGCGATCGTC GAAATGTCGC ACGCGATGCC CGACGTCGAG CTGATCCCAT TCGCGGTGAT CGGGGACAAG TGGCGCGACG AACCGTGGTG GACCAGTGGC GCGACGCTGC GGCTGCTGCT ATCGGAATAC GCGAAATACG TCGCCGTCGA AGCGAGGGTG CGGCTGGCGC GACTGGGCAT CGAACTGGCG CCCGAGGCCT CGGAGCTGGC GCCCGAGCCG GCGGCCCGCA AGCCGACGAC GGCGCTCGCG AACTGA
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Protein sequence | MELPTDQQPT RTAPGKPARR PGRLRAVIVA TLALGFVATA AGFVAFLAQL RGAELKPNRT ADGIVVLTGG SSRVSDAVEL LASGYGKRLL ISGVHRTNGA SDISRSVPDS KDWLDCCVDL DRSAVNTRSN AAETRRWAHE RGFHSLIVVT SNYHMPRAIV EMSHAMPDVE LIPFAVIGDK WRDEPWWTSG ATLRLLLSEY AKYVAVEARV RLARLGIELA PEASELAPEP AARKPTTALA N
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