Gene RPD_0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0943 
Symbol 
ID4021418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1059977 
End bp1060636 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content63% 
IMG OID637961134 
ProductABC transporter related 
Protein accessionYP_568082 
Protein GI91975423 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2884] Predicted ATPase involved in cell division 
TIGRFAM ID[TIGR02673] cell division ATP-binding protein FtsE 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.505672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTCCGCT TCGAAAATGT CGGCCTGCGC TATGGACTCG GTCCAGAGAT CCTGCGCGAT 
CTCAATTTCG CGATCCCGGC GCATTCCTTC CAGTTCCTGA CCGGGCCGTC CGGCGCGGGC
AAGACCTCGC TGCTGCGGCT GTTGTTCTTG TCGCTGCGGC CCACCCGCGG GCTCGTCAAT
CTGTTCGGTA ACGACGTCTC TCTGCTCACC AAGGACGAGG TCTCGGCCTT GCGGCAGCGG
ATCGGCATCG TGCTGCAGGA TTTTCGGCTG CTCGATCACA TGACGACCTA CGAGAACGTG
GCGTTGCCGT TCCGCGTCAG CGGCCGCGAC GAGTCGAGCT ACCGCAAGGA AGTGATCGAT
CTGTTGAAAT GGGTCGGACT GGGCGAACGC ATGGACGCGC TGCCGCCGGT GCTGTCCGGC
GGCGAGAAGC AGCGCGCCGC TATCGCGCGC GCGGTGATCG GCCGACCGCA ATTGCTGCTT
GCCGACGAGC CGACCGGTAA CGTCGATCCG ACGCTCGGCC GCCGGCTGTT GCGGCTGTTC
GTCGAGCTCA ACAAGTCCGG GACCGCGGTG GTGATCGCGA CCCATGATAT CAATCTGATG
GATCAGTACG AGGCGAGGCG CATGGTGCTG CATCAGGGAC GGCTGCACAT CTATGAATAG
 
Protein sequence
MVRFENVGLR YGLGPEILRD LNFAIPAHSF QFLTGPSGAG KTSLLRLLFL SLRPTRGLVN 
LFGNDVSLLT KDEVSALRQR IGIVLQDFRL LDHMTTYENV ALPFRVSGRD ESSYRKEVID
LLKWVGLGER MDALPPVLSG GEKQRAAIAR AVIGRPQLLL ADEPTGNVDP TLGRRLLRLF
VELNKSGTAV VIATHDINLM DQYEARRMVL HQGRLHIYE