Gene RPD_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0930 
Symbol 
ID4021405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1047635 
End bp1048384 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content63% 
IMG OID637961121 
Productelectron transfer flavoprotein beta-subunit 
Protein accessionYP_568069 
Protein GI91975410 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTTC TGGTGCCGGT CAAGCGGGTG GTCGACTACA ACGTCAAGAT CAGGGTCAAG 
AGTGACGGAT CCGGCGTTGA GCTCACCAAC GTCAAGATGT CGATGAATCC GTTCGATGAA
ATTGCGGTCG AGGAAGCCCT GCGGCTGAAG GAGGCCGGCA AAGCGACCGA GGTGGTGGTG
GTCTCGATCG GACCGGCGCA GGCTTCGGAA ACGCTGCGCA CGGGTCTTGC GATGGGCGCC
GACCGCGGCA TCCTGGTCAA GGCCGAGGGC ACCGTCGAGC CGCTGGCAGT GGCCAAGATC
CTCAAGGCGA TTGCCGATGA GGAACAGCCC GGACTGATCA TTCTCGGCAA GCAGGCGATC
GACGACGATA GCAACCAGAC CGGCCAGATG CTGGCGGCGC TGCTGGGCTG GGCGCAGGCG
ACTTTCGCCT CCAAGCTCGA AGTCGAAGGC TCCGACTTTA CGGTGTCGCG TGAAGTCGAC
GGCGGTTCGC AGACCGTGAA GCTGAAGGGT CCGGCGATCG TCACCACCGA TCTGCGGCTG
AACGAGCCGC GCTACGCCAG CCTGCCCAAC ATCATGAAGG CGAAGAAGAA GCCGATCGCC
GAGAAGACCG CGGACCAGTA CGGCGTCGAT CTCGCGCCGC GTCTGGAAGT CCTCAAGACC
GTCGAACCGA GCGGCCGCAA GGCCGGCGTC AAGGTCAAGG ACGTCGCCGA ACTGGTCTCC
AAACTCAAGA ACGAAGCGGG TGTTATCTGA
 
Protein sequence
MKVLVPVKRV VDYNVKIRVK SDGSGVELTN VKMSMNPFDE IAVEEALRLK EAGKATEVVV 
VSIGPAQASE TLRTGLAMGA DRGILVKAEG TVEPLAVAKI LKAIADEEQP GLIILGKQAI
DDDSNQTGQM LAALLGWAQA TFASKLEVEG SDFTVSREVD GGSQTVKLKG PAIVTTDLRL
NEPRYASLPN IMKAKKKPIA EKTADQYGVD LAPRLEVLKT VEPSGRKAGV KVKDVAELVS
KLKNEAGVI