Gene RPD_0923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0923 
Symbol 
ID4021398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1041931 
End bp1042521 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content64% 
IMG OID637961114 
Productcytochrome B561 
Protein accessionYP_568062 
Protein GI91975403 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.651214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTACA CGAATGCGGT CGGGATCGCT TCGCCGCCCA CTGACAGCCG CTACGATTCG 
TTCACGCAGT CGATCCACTG GCTGACGCTG CTGGCCGTCG CCATTGCGTT CGGGGCCGGC
CTCGTCATGG AGGAGATGCC TCGCGGCCCC GAGAAGGCCC AGCTCGTCAA TCTGCATACT
TCGATTGGCG TGGTGTTGAT GGCGTTGACC GCAATCCGGC TGAGCTGGCG CGTGGCGGCG
CCGGCGCTGC AGCCGACGCC TGGACCGCAA TTGCTGCGTC TCGGCGCCAA GGTGGTGCAT
GTGGCTCTCT ACCTCGTGCT CTTTGCAATA CCGATAACAG GCCTGCTGAT GATGGCGGCG
AAGGGGCGCG CGGTCGAGGT GTTCGGCCTT TTCACCCTGC CGCCGCTGAT GCCGACGGAT
CGCGCGCTCG CGCATTCGCT CGAGGACGTC CACGAAGTCC TGGCCAATCT GTTGTTGTGC
TTGGTCGGCG TTCACACCGC CGCGGCCTTG TTGCATCGGT TCGTGTTGCG GGATTCGGTG
TTGAGCCGGA TGCTTCCGGT CGGCGCCAAG ACCGAGGCGG AGCGACGATG A
 
Protein sequence
MSYTNAVGIA SPPTDSRYDS FTQSIHWLTL LAVAIAFGAG LVMEEMPRGP EKAQLVNLHT 
SIGVVLMALT AIRLSWRVAA PALQPTPGPQ LLRLGAKVVH VALYLVLFAI PITGLLMMAA
KGRAVEVFGL FTLPPLMPTD RALAHSLEDV HEVLANLLLC LVGVHTAAAL LHRFVLRDSV
LSRMLPVGAK TEAERR