Gene RPD_0900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0900 
Symbol 
ID4021374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1013427 
End bp1014206 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content65% 
IMG OID637961090 
Producthypothetical protein 
Protein accessionYP_568039 
Protein GI91975380 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCCG GCAGGATGGC CAGCTTTGGA TTTGTGCTGG GCATCGCCCT GCTGGCAGCG 
CTTGGAACGC CGGCTTGCGC CGCGCCCGAG ACGTCGCCGC AGAATTGCGA CGCGCCGGCC
TATCTGCTGT CGACCGACGC CACCCTGGCC AAGGTCGCCA CCGCGCTGAA GACCGACCGC
AAGCTCGATA TTCTGGTGAT CGGTAGCCGC TCCTCCAGCA TCGGCTCGGC CGAGAGCACG
GCCTATCCGG CGCGGTTGCA GACGCAACTC CGCGAAAGGC TGCCCGGCGT CGCCGTCAAC
GTCACCGTCG AGATGCGGGC GAAGCGCACC GCCGCCGAAG TCGCGCCCGG CCTCGGCCAG
CTCGTCGCCG AGCGCAAGCC TGCCTTGCTG ATCTGGCAAA CCGGCACTTA CGACGCGATC
CGCTCGGTCG ATCCCGACGA GTTTCGCAGC GCGCTCGGCG ACGGCATCGA AGCGTCGAAG
AAGGCCGGCG CCGACGTCAT CCTGATGAAT CTGCAATACA GCCCCCGCAC CGAAACCATG
ATCAATCCGG CGCCCTATCT CGATAATATG CGGGTGGTGG GACAGGAGCA CGATGCGCCG
CTGTTCGATC GGTTTGCGCT GATGCGGCAT TGGAACGAGA CCGGAGAATT CGATCTGTTC
AGCCCTTCGC CGGGCATCGA CCTGGCGATG CGGGTGCACA ATTGCATCGC GCGCGCGCTG
TCGAGCTTCG TGATCGATGC GACGAAGATC AATCCATCGG AGTTGAGGAC GCTGCGTTAA
 
Protein sequence
MMAGRMASFG FVLGIALLAA LGTPACAAPE TSPQNCDAPA YLLSTDATLA KVATALKTDR 
KLDILVIGSR SSSIGSAEST AYPARLQTQL RERLPGVAVN VTVEMRAKRT AAEVAPGLGQ
LVAERKPALL IWQTGTYDAI RSVDPDEFRS ALGDGIEASK KAGADVILMN LQYSPRTETM
INPAPYLDNM RVVGQEHDAP LFDRFALMRH WNETGEFDLF SPSPGIDLAM RVHNCIARAL
SSFVIDATKI NPSELRTLR