Gene RPD_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0872 
Symbol 
ID4021346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp978190 
End bp978669 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content64% 
IMG OID637961062 
Productheat shock protein Hsp20 
Protein accessionYP_568011 
Protein GI91975352 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.790875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACTT TCGATCTCAC CCCGTTCTAT CGCTCCACCA TCGGTTTCGA CCGCCTGTTC 
AATCTGCTGG ATCAGACCCC CGGCGATGCG GCAGCCCCCG GCTATCCGCC CTACAACATC
GAGCGGACCG GCGAAAACGC CTACCGGATC AGCGTCGCGG TCTCCGGCTT CTCCTCCGCC
GAGCTGTCGA TCGTGTCCAA GGAAAACACC CTGACGATCA AGGGCGAGAA GACCGCCAAT
GAGAACGGCG CCAAGTCCGA GGTGCTGTAT CGCGGCATCG CCGCGCGTGC CTTCGAGCGG
GCGTTTCAGC TCGCCGACTA CGTCACGGTG AAGAACGCCA CCCTCGAGAA CGGCCTGCTG
CATGTCGATC TCGTGCGCGA GATTCCCGAG GCCAAGAAGC CGCGCAGCAT TCCGATCAGC
ACGACGGCCG CGTCCGCGCC GCAAGTGGTC GATCAGTCCA ACGCGAAGGC GGCTGCGTAA
 
Protein sequence
MRTFDLTPFY RSTIGFDRLF NLLDQTPGDA AAPGYPPYNI ERTGENAYRI SVAVSGFSSA 
ELSIVSKENT LTIKGEKTAN ENGAKSEVLY RGIAARAFER AFQLADYVTV KNATLENGLL
HVDLVREIPE AKKPRSIPIS TTAASAPQVV DQSNAKAAA