Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0862 |
Symbol | |
ID | 4021336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 966741 |
End bp | 967751 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637961052 |
Product | band 7 protein |
Protein accession | YP_568001 |
Protein GI | 91975342 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.464796 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGATC TGTCTGGCTT CGATATTTTT TCCATCGTTC TCGTGCTGTT GGTGATCCTG ACGCTGTTCG CCGGGGTCAA GACCGTGCCA CAGGGCTACA ACTGGACCAT CGAGCGGTTC GGCAAATTCA CCCGCACGCT GTCTCCGGGC CTCAATCTGA TCATTCCGTA TTTCGATCGC GTCGGCCGCA AGATGAACGT GATGGAGCAG GTGATCGATA TTCCGCAGCA GGAAGTCATC ACCAAGGACA ACGCCACCGT GACGGTCGAC GGCGTCGCCT TCTTCCAGGT GTTCGACGCG GCGAAAGCGA GCTACGAGGT CTCCAATCTC GAACAGGCGA TCATCGTGCT GACGATGACC AACATCCGCT CGGTGATGGG CGCGATGGAT CTCGATCAGG TGCTGTCGCA TCGCGACGAG ATCAACGAGC GGTTGCTGCG GGTGGTCGAC GCCGCGGTGT CGCCGTGGGG GCTCAAGGTC AATCGCATCG AGATCAAGGA CATCGTGCCG CCGGCCGATC TGGTCGAGGC GATGGGACGT CAGATGAAGG CCGAGCGCGT CAAGCGCGCC GACATCCTGC AGGCGGAAGG CCAGCGGCAA TCGGAGATTC TCCGCGCCGA GGGCGCCAAG CAGGGCCAGA TCCTACAGGC CGAAGGCCGC CGCGAGGCGG CGTTCCGCGA CGCCGAAGCG CGCGAGCGAT CGGCCGAGGC GGAAGCCCGC GCCACCCAGA TGGTCAGCGA CGCGATCGCC AAGGGCGACG TCGCCGCGTT GAACTACTTC ATCGCCGACA AATACATCAA GGCGTTCGGC CAGATCGCGG ACTCTCCGAA CCAGAAGATC ATCATGCTGC CGATCGAGGC GATGAACGTG CTCGGCTCGC TGGCCGGAAT CGGCGAGATC GCCAAGGCGA CCTTCGGCGA AAGCGCGGCC TCGGCGCAGG CGGCCGCGCG CCGCGGCTCA GTGCCGACCA CCGGCGCCGC CCCGACGCCG CCGTCGACGA CGCGCGCGTG A
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Protein sequence | MYDLSGFDIF SIVLVLLVIL TLFAGVKTVP QGYNWTIERF GKFTRTLSPG LNLIIPYFDR VGRKMNVMEQ VIDIPQQEVI TKDNATVTVD GVAFFQVFDA AKASYEVSNL EQAIIVLTMT NIRSVMGAMD LDQVLSHRDE INERLLRVVD AAVSPWGLKV NRIEIKDIVP PADLVEAMGR QMKAERVKRA DILQAEGQRQ SEILRAEGAK QGQILQAEGR REAAFRDAEA RERSAEAEAR ATQMVSDAIA KGDVAALNYF IADKYIKAFG QIADSPNQKI IMLPIEAMNV LGSLAGIGEI AKATFGESAA SAQAAARRGS VPTTGAAPTP PSTTRA
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