| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0841 |
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| Symbol | |
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| ID | 4021315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 947338 |
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| End bp | 948066 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637961031 |
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| Product | putative outer membrane protein |
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| Protein accession | YP_567980 |
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| Protein GI | 91975321 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.227029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAGA TCCTTCTCGC AACCGTCGCT CTGGTTGCCT TCGGCGCGGC TCCGGCCCTC
GCCGCCGACC TCGCGGCCCG CCCCTACAAC AAGGCCCCGG TCTACGCTCC CCCGGTTCCG
ATCTATAACT GGACCGGCTT CTACATCGGT GGTCACATCG GCGGCGCCTT CGCCGGCGAC
AACAGCATCG GCACCGGCGT CACCGCCAAC AGCGATGGCA AGTTCCTCGG TGGTGTGCAG
GCTGGTTACG ACTGGCAGTT CGCTCCGAGC TGGGTGCTCG GTGTTGAAGG TCAGTACTCC
TGGCTGAGCG GCTCCAACGA CGCGGTCGCC TTCACCGTGG TCGGCCAGCC CGGCACCTAC
ACCTTCTCGG ATAACCAGCG TGGTCTGGCT TCGGTCACCG GCCGCCTCGG CTACACCTGG
GGTCCGGCGC TGCTCTACGT CAAGGGCGGT TGGGCCTACG CCGACTACAA GTCGAGCCTG
ACCTTCACTG CCCCCGGCGG CGCTGCCGTT GGCGTCTCGT CCACCAGCAG CCAGGACGGT
TACACCGTCG GCGCCGGCCT CGAGTACCTG TTCGCTCAGA ACTGGTCGGG CAAGATCGAA
TACCAGTACT ACGACTTCGG CAACGTCGAT CTGGGCGCTG GCTTCACCGC CAAGAACGAC
CAGCACGTCG TCAAGGCCGG CCTGAACTAC CGCTTCAACT GGGGTGGCCC GGTCGTCGCG
AAGTACTGA
|
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| Protein sequence | MKKILLATVA LVAFGAAPAL AADLAARPYN KAPVYAPPVP IYNWTGFYIG GHIGGAFAGD
NSIGTGVTAN SDGKFLGGVQ AGYDWQFAPS WVLGVEGQYS WLSGSNDAVA FTVVGQPGTY
TFSDNQRGLA SVTGRLGYTW GPALLYVKGG WAYADYKSSL TFTAPGGAAV GVSSTSSQDG
YTVGAGLEYL FAQNWSGKIE YQYYDFGNVD LGAGFTAKND QHVVKAGLNY RFNWGGPVVA
KY
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