| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0835 |
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| Symbol | |
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| ID | 4021309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 935891 |
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| End bp | 937555 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637961025 |
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| Product | general substrate transporter |
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| Protein accession | YP_567974 |
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| Protein GI | 91975315 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0740201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCT ATGCCGCGAC GCAGGTGCGG TCCAGCGGAA TGACGAAGGA CGAACGTTTC
GTCATTGTCG CATCGTCGCT CGGTACCGTT TTTGAGTGGT ACGATTTCTA TCTGTACGGA
TCGCTCGCAG CCATTATCGG CGCGCAATTC TTCAGTGCCT ATCCGCCTGC GACGCGCGAC
ATCTTCGCGC TTCTGGCCTT CGCCGCCGGC TTTCTCGTGC GCCCGTTCGG CGCCATCGTG
TTCGGTCGTG TCGGCGACAT CGTCGGCCGT AAATACACCT TCCTCGTCAC CATTCTGATC
ATGGGCCTGT CGACGTTCAT CGTCGGCCTG CTGCCCAATG CGGCGACGAT CGGCATCGCG
GCGCCGATTA TCCTGATCGG TCTGCGCCTG CTGCAGGGCC TCGCGCTCGG CGGTGAATAT
GGCGGCGCGG CGACCTATGT GGCCGAGCAC GCACCTCCCG GCAAACGCGG CTACTACACG
TCGTTCATCC AGACCACGGC AACACTCGGA CTATTCCTGT CGCTGATGGT GATCCTGTTC
ACCCGCACGA TTCTCGGCGA AGCCGCGTTC GCGGATTGGG GCTGGCGTGT TCCGTTCCTG
GTGTCGGTCG TGCTGCTCGG CGTTTCGGTC TGGATCCGGC TGCGGCTGAA CGAATCTCCC
GTGTTCCAGA AGATGAAGGA CGAGGGCAAG AGCTCGAAGG CGCCGTTGAC CGAAGCCTTT
GCGAACTGGG GCAACGCCAA GATCGTGCTG ATCGCACTGT TCGGCGCCGT GATGGGTCAG
GGCGTGGTCT GGTACACCGG CCAGTTCTAC GCGCTGTTCT TCCTGCAATC GATCCTGAAG
GTCGACGGCT ACACCTCGAA CCTGCTGATC GCCTGGTCGC TGCTGCTCGG CACCTTCTTC
TTCATCGTGT TCGGTTGGCT GTCCGACAAG ATCGGTCGCA AGCCGATCAT CCTCACCGGC
TGCGCGATCG CTGCGCTGTC GTTCTTCCCG ATCTTCAAGG CGATCACCTC CAACGCCAAC
CCGGCGCTGG AAAGGGCCAT CGAGACCGTC AAGGTCGAGG TGGTGTCGGA TCCGGCGCTG
TGCGGCGACC TGTTCAACCC GGTCGGCACC CGCGTCTTCA CCGCCCCGTG CGACACCGCC
CGCGCCTACC TGTCGCAATC CTCGGTCAAG TACTCGACCA CCAACGGCCC GGCCGGCTCC
GGCGTCAAGG TGCTCGTGAA CGGCACGGAA GTGCCCTACA CCGACGCCAA AACGTCCAAT
CCGCAGGTGC TGGCGACGAT CCAGGCGGCC GGCTATCCGA AGGCGGGAAA TTCTGAAATC
ATCAAGATGT CGAACCCATT CGACATCTTC CGCCCGCAAG TGATGGCGGT GATCGGGCTG
CTGTTCGTCC TGGTGCTGTT CGTCACCATG GTTTACGGGC CGATCGCGGC GATGCTGGTC
GAACTATTCC CGACCCGCAT CCGCTACACC TCGATGTCGC TGCCCTACCA CATCGGCAAC
GGCTGGTTCG GTGGCCTGCT GCCCGCGACC GCCTTCGCGA TCGTGGCCTC GACCGGCGAT
ATCTACGCCG GCCTCTGGTA CCCGATCATC TTCGCGTCGA TCACCGTCGT GATCGGCCTG
ATCTTCCTGC CAGAGACCAA ACACGTCGAT ATCAGCAAAA CCTGA
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| Protein sequence | MSTYAATQVR SSGMTKDERF VIVASSLGTV FEWYDFYLYG SLAAIIGAQF FSAYPPATRD
IFALLAFAAG FLVRPFGAIV FGRVGDIVGR KYTFLVTILI MGLSTFIVGL LPNAATIGIA
APIILIGLRL LQGLALGGEY GGAATYVAEH APPGKRGYYT SFIQTTATLG LFLSLMVILF
TRTILGEAAF ADWGWRVPFL VSVVLLGVSV WIRLRLNESP VFQKMKDEGK SSKAPLTEAF
ANWGNAKIVL IALFGAVMGQ GVVWYTGQFY ALFFLQSILK VDGYTSNLLI AWSLLLGTFF
FIVFGWLSDK IGRKPIILTG CAIAALSFFP IFKAITSNAN PALERAIETV KVEVVSDPAL
CGDLFNPVGT RVFTAPCDTA RAYLSQSSVK YSTTNGPAGS GVKVLVNGTE VPYTDAKTSN
PQVLATIQAA GYPKAGNSEI IKMSNPFDIF RPQVMAVIGL LFVLVLFVTM VYGPIAAMLV
ELFPTRIRYT SMSLPYHIGN GWFGGLLPAT AFAIVASTGD IYAGLWYPII FASITVVIGL
IFLPETKHVD ISKT
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