Gene RPD_0830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0830 
Symbol 
ID4021304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp932409 
End bp933161 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content59% 
IMG OID637961020 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_567969 
Protein GI91975310 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.109906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCG ATCCAATTCA TCAGTTCCAG ATCACCAAGC TCTTTACCCT TGGTCACATT 
GGCGGACAGG AAATCGCGTT CACCAATTCA TCGGCCTACA TGTTCCTCTC GGTGGGGGTC
ATCTCCCTGC TGATGATCGG CGGCATGGCC GGACGACAGC TCGTTCCGGG GCGGATCCAG
TCGGTCGCCG AGCTGAGCTA CGAATTCGTC GCGGGAATCA TCCGCAGCAC CGCCGGTAAG
GAAGGGATGA AGTTCTTCCC GCTGGTGTTC TCGCTGTTCA TGTTCATCGC CGTCTCGAAC
CTGATCGGCA TCATTCCCTA CACCTTCACG GTGTCGAGCC ACCTGATCGT CACCGTCGCG
CTGGCGCTGT TGGTGTTCGT GATCGTGCTG TTTTACGGCT TGTACAAAAA CGGCCTGAAA
TTCTTCAAGC TGTTCGTACC GTCCGGCGTT CCGGTCTACA TCCTGCCGCT GGTCGTGTTC
ATCGAAGTCA TCTCCTTCTT CCTCAAGCCG GTTTCGCACT CGGTGCGTCT GTTCGCCAAC
ATGCTGGCGG GCCATATCGC GCTGAAGGTG TTCGCGAGCT TCGTCGGAAT GCTGGGCGCG
CTCGGCTTTC TCGGCTGGAT GGGCGCGATC CTGCCGCTCG GCCTGACCGT GGCGGTGACC
GCGCTCGAGA TTCTGGTCGC ATTCCTGCAG GCCTACGTCT TCACCATCCT GACTTGCATC
TATCTCAACG ATGCGATGCA TCCGGGCCAC TGA
 
Protein sequence
MAADPIHQFQ ITKLFTLGHI GGQEIAFTNS SAYMFLSVGV ISLLMIGGMA GRQLVPGRIQ 
SVAELSYEFV AGIIRSTAGK EGMKFFPLVF SLFMFIAVSN LIGIIPYTFT VSSHLIVTVA
LALLVFVIVL FYGLYKNGLK FFKLFVPSGV PVYILPLVVF IEVISFFLKP VSHSVRLFAN
MLAGHIALKV FASFVGMLGA LGFLGWMGAI LPLGLTVAVT ALEILVAFLQ AYVFTILTCI
YLNDAMHPGH