Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0815 |
Symbol | |
ID | 4021289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 919666 |
End bp | 921291 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637961005 |
Product | cytochrome-c oxidase |
Protein accession | YP_567954 |
Protein GI | 91975295 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0856305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATGG AAGCTGCAAG GGTTGCTCAT TCCGATCACG CGCATGACGA TCACGCCCAT GCGCATCCGA CAGGGTGGCG GCGCTACGTC TACTCGACCA ATCACAAGGA CATCGGCACC ATGTATCTGA TCTTCGCGAT TATCGCGGGG ATCATCGGCG GCGCGATGTC GATCGCGATC CGGATCGAGC TGATGTACCC GGGCGTGCAG ATCTTCCACG AAAGCCACAC CTACAACGTG TTCGTCACCT CGCACGGCCT GATCATGATC TTCTTCATGG TGATGCCGGC GATGATCGGC GGCTTCGGCA ACTGGTTCGT GCCGCTGATG ATCGGCGCGC CCGACATGGC GTTCCCGCGC ATGAACAACG TGTCGTTCTG GTTGCTGCCG GCCGCGTTCG CGCTGCTGCT GATCTCGACC TTCGTGGAGG GCGAGCCTTC GTCGAACGGC GTCGGAGCGG GCTGGACGAT GTACGCCCCG CTATCGACCT CGGGGCATCC CGGCCCCGCG GTCGACTTCG CCATCCTGGC CCTGCACATC GCCGGCGCCT CGTCGATCCT CGGCGCCATC AATTTCATCA CCACGATCTT CAACATGCGC GCGCCGGGCA TGACCCTGCA CAAGATGCCG CTGTTCGTGT GGTCGATCCT GGTCACCGTG TTCCTGCTGC TGCTGTCGCT GCCGGTGCTC GCCGGCGCGA TCACCATGCT GCTGACCGAT CGCAATTTCG GCACGACCTT CTTCTCGGCC GAAGGCGGCG GCGATCCGTT GCTGTTCCAG CATCTGTTCT GGTTCTTCGG CCATCCGGAA GTCTACATCC TGATCCTGCC GGCGTTCGGC ATGGTCAGCC AGATCGTCTC GACCTTCTCC AAGAAGCCGG TGTTCGGCTA TCTCGGCATG GCCTACGCGA TGGTGGCGAT CGGCGTGATC GGCTTCGTGG TCTGGGCGCA CCACATGTAC ACGGTCGGGA TGTCGAGCAC GACGCAGGCC TATTTCGTCG CCGCCACGAT GGTGATCGCG GTGCCGACCG GCGTGAAGAT CTTCTCCTGG ATCGCCACGA TGTGGGGCGG CTCGATCGAG TTCAAGACGC CGATGCTGTG GGCGGTCGGC TTCATTTTCC TGTTCACCGT CGGCGGCGTC ACCGGCGTGG TGCTGGCCAA TGCCGGCGTC GACCGCGTGC TGCAGGACAC CTATTACGTC GTCGCGCACT TCCACTACGT GCTGTCGCTC GGCGCCGTGT TCGGGATCTT CGCCGGCTGG TACTACTGGT TCCCGAAGAT GTTCGGCTAC ATGTACAGCG AGACGATCGG CAAGCTGCAC TTCTGGGTGA CGTTCATCGG CGTCAACATG GTGTTCTTCC CGCAGCACTT CCTCGGACTG TCGGGGATGC CGCGCCGCTA CGTCGACTAT CCGGACGCGT TCGCCGGCTG GAACCTGGTG TCGTCGATCG GCTCCTACAT CTCCGGCTTC GCCGTGCTGA TCTTCCTGTT CGGGATGACG CTCGCCTTCA TCCGCAAGGA GAAGGCGGCG GACAATCCGT GGGGCGTCGG CGCTACCACG CTGGAATGGA CCCTTTCGTC GCCGCCTCCG TTCCATCAGT TCGAAGTGCT GCCGCAGGTG CGCTGA
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Protein sequence | MTMEAARVAH SDHAHDDHAH AHPTGWRRYV YSTNHKDIGT MYLIFAIIAG IIGGAMSIAI RIELMYPGVQ IFHESHTYNV FVTSHGLIMI FFMVMPAMIG GFGNWFVPLM IGAPDMAFPR MNNVSFWLLP AAFALLLIST FVEGEPSSNG VGAGWTMYAP LSTSGHPGPA VDFAILALHI AGASSILGAI NFITTIFNMR APGMTLHKMP LFVWSILVTV FLLLLSLPVL AGAITMLLTD RNFGTTFFSA EGGGDPLLFQ HLFWFFGHPE VYILILPAFG MVSQIVSTFS KKPVFGYLGM AYAMVAIGVI GFVVWAHHMY TVGMSSTTQA YFVAATMVIA VPTGVKIFSW IATMWGGSIE FKTPMLWAVG FIFLFTVGGV TGVVLANAGV DRVLQDTYYV VAHFHYVLSL GAVFGIFAGW YYWFPKMFGY MYSETIGKLH FWVTFIGVNM VFFPQHFLGL SGMPRRYVDY PDAFAGWNLV SSIGSYISGF AVLIFLFGMT LAFIRKEKAA DNPWGVGATT LEWTLSSPPP FHQFEVLPQV R
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