| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0804 |
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| Symbol | |
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| ID | 4021278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 906012 |
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| End bp | 907802 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637960994 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_567943 |
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| Protein GI | 91975284 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCT ACAAGGCACC CGTTGAAGAT GTCGGCTTCC TGCTCAACGA CGTATTTCAG
TTCGACCGCT ACAACAATCT GCCCGGCTTT GCCGACGCGG CGCCCGACGT GCGCGACGCC
ATCATCAACG AGGCGGCGCG GCTGAGCGAG CAGGTGCTGC AGCCGCTGAA CGCCGTCGGC
GATCGCGAAG GCTGCATCCG TCACGACGAC GGCAGCGTCA CCACGCCGAA GGGCTTCAAG
GAGGCCTACA AGCAGATCGC GGATGGCGGC TGGCTCGGTC TGTCGTCGCC GCCCGAATTC
GGCGGCCAGG GTCTGCCGAT CACGCTGACC CAGACCGTCT CCGAGTTCCA GACCTCGGCC
AACATGGCGT TCTCGATGTA TCACGGCCTG ACCATGGGCG CCGCCGCGGC GCTGCTGGTG
CATGGCAATG CAGAGCAGAA GGCGCTCTAT CTGCCGAAGA TGACGGCCGG CGAGTGGACC
GGCACCATGA ACCTGACGGA GCCGCAATGC GGCACCGATC TCGGTCTGCT GCGCACCAAG
GCGGTGAAGC AGGCCGACGG CAGCTACAAG CTGACCGGCA CCAAGATCTT CATTTCCGCC
GGCGAGCATG ATCTGGCCGA CAACATCATC CATCTGGTGC TGGCGCGGAT CGAAGGCGCG
CCGGCCGGGA TCAAGGGCGT CTCGCTGTTT GTGGTGCCGA AGTTCCTGGT CAATCCCGAC
GGATCGATCG GCGCCCGCAA CGGCGTGATG TGCGGCTCGA TCGAGCACAA GATGGGCATC
CACGGCAACG CCACCTGCAC CATGAACTAC GACGACGCCA CCGGCTGGCT GATCGGCGAA
GAGAACAAGG GCATGCAAGG CATGTTCGTG ATGATGAACG AGGCCCGGCT CGGCGTCGCG
GTGCAGGGCC TCGCGCAATC CGAGGTCGCG TATCAGAACG CGGTCGCCTA TGCGCGCGAG
CGCCTGCAGG GTCGCGCGCT GTCCGGCCCG AAGGCGACCG ACAAGCCGGC CGATCCGATC
ATCGTGCATC CGGACGTGCG CCGCGCGCTG CTTACCATCC GCTCCTTCAA TGAAGCGGCG
CGGGCGCTGG TGATGTGGAC CGCGCTGAAG AGCGACGTCG CGCATCGCTC CGACGACGCC
AAGGAGCGGC AGACCGCCGA CGATCATCTC GGCCTGATGA CCCCGGTGCT CAAGGGCGTG
CTGACCGATG TCGGCTTCTC CAACGCGGTC CTCGCGCAAC AGGTCTATGG CGGCCACGGC
TACATCGCCG CCAACGGCAT GGAGCAGTTC GTCCGCGACG CCCGCATCGC GATGATCTAC
GAGGGCGCCA ATGGCATTCA GGCGCTCGAC CTGGTCGGCC GTAAGCTGCC GCGTGACGGC
GGCCGTGCGG TGATGGCGTT CTTCGCCGAG GTCGGCGCCT TCGCCAAGGA GCACGGCGGC
GACGACGCGA TGAAGCCTTT CGTCACGCCG CTGTCGACCG CGCTCGGCCA TTTGCAGCAG
GCCACTACCT GGCTGATGCT GAATGCGATG GCGGCTCCCG ACAACGCCGG CGCCGGCGCG
ACCGATTACA TGCAGCTGTT CGGCCGGGTG GCCTGCGGCT ACATGTGGGC GAAGATGGCC
AAGGTCGCGC AGGACAAGAT TACCGCCGGC GGCGCCACGC CCTATCTGAC CACCAAACTG
GTCACCGGCC GGTTCTTCAT GGAGCGGTCG CTGCCCGAAA CCGCGTTGCA CCTGGCGCGG
ATCCAGACCG GCAGCGCGAC CACCATGGAA TTGTCCGCGG AAGCGTTCTG A
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| Protein sequence | MTIYKAPVED VGFLLNDVFQ FDRYNNLPGF ADAAPDVRDA IINEAARLSE QVLQPLNAVG
DREGCIRHDD GSVTTPKGFK EAYKQIADGG WLGLSSPPEF GGQGLPITLT QTVSEFQTSA
NMAFSMYHGL TMGAAAALLV HGNAEQKALY LPKMTAGEWT GTMNLTEPQC GTDLGLLRTK
AVKQADGSYK LTGTKIFISA GEHDLADNII HLVLARIEGA PAGIKGVSLF VVPKFLVNPD
GSIGARNGVM CGSIEHKMGI HGNATCTMNY DDATGWLIGE ENKGMQGMFV MMNEARLGVA
VQGLAQSEVA YQNAVAYARE RLQGRALSGP KATDKPADPI IVHPDVRRAL LTIRSFNEAA
RALVMWTALK SDVAHRSDDA KERQTADDHL GLMTPVLKGV LTDVGFSNAV LAQQVYGGHG
YIAANGMEQF VRDARIAMIY EGANGIQALD LVGRKLPRDG GRAVMAFFAE VGAFAKEHGG
DDAMKPFVTP LSTALGHLQQ ATTWLMLNAM AAPDNAGAGA TDYMQLFGRV ACGYMWAKMA
KVAQDKITAG GATPYLTTKL VTGRFFMERS LPETALHLAR IQTGSATTME LSAEAF
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