| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0796 |
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| Symbol | |
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| ID | 4021270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 894262 |
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| End bp | 895482 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637960986 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_567935 |
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| Protein GI | 91975276 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGC GCTCCACTTC CGTCTTCACG TCCGCAGGCG CTTTCGCCGC GGTTTTGCTC
GCCGCCACAT CGGTGGCTGC GGCGGAGAAG AAGTACGATC CCGGCGCCAG CGATACCGAA
ATCAAGATCG GCCAGACTGT TCCGCATTCC GGTCCGGGTT CGCTGTACGG CGTGCTCGGC
CGCGTCGGCG AAGCCTATTT CCAGATGCTG AACGAGAAGG GCGGCATCAA CGGGCGCAAG
GTGAAGTTCC TGACCCTGGA CGATTCCTAC AGCTCCCCGA AGGCGGTGGA GGCGACCCGC
CGGCTGGTCG AGCAGGAAGA GGTGCTGGCG CTGTATGGCT CGCTCGGCAC CGCGCCGCAG
ACCGCTGTGC ACAAATACCT CAACAGCAAG AAGGTCCCGC AGCTTCTGCT GAACACCGGT
GCGTCGAAGT GGAACGACCC GAAGAACTTC AAATGGACCA TGGCGGGCCT GCCGCTGTAC
CCCACCGAGG CCCGCATCCT CGCCAAACAC GTCGTGAGCG TGAAGCCCGA CGCCAAGATC
GCGATTCTCT ACCAGAACGA CGATTTCGGT CGTGACTTCC TCGGACCGTT CAAGAAGGTT
CTGGAAGAAG CCGGCGGCAG GGCCAAGGTG GTCGCCGAGG CCAGCTACGA CCTGACCGAG
CCGACCATCG ATTCGCAGAT GATCAACCTG TCGAAGTCCG GCGCCGACGT GTTCTACAAC
ATCACCACCG GCAAGGCGAC GTCGCAGTCG ATCCGCAAAG TGGCCGAGCT CGGCTGGAAG
CCGCTGCAGT TGTTGTCGGC GGGCTCGACC GGCCGTTCGA TTCTCAACGC CGCCGGCATC
GAGAATGCGA CCGGTATCGT CGCGATCCGC TACTCCAAGG AGGTCGGTGT GCCGCGATTT
GAGAACGATC CGGACGTCAA GGCGTTCGAG GAGTTCCGCC AGAAGTATCT GCCGAACGTC
GACAAGGACA ACACCATCGC CTACGCCGGC TACGGCCAGG TGGTGACGAT GGCCGAGATC
CTGCGCCGCT GTGGCGACAA CCTCACCCGC GAGAACGTGC TGAAGCAGGC GACCTCGCTG
AAGGGCTTCC ACTCGCCGTA TTTCCTCGAC GGCATCGAAT ATAGCTACAC GTCGGACGAC
TACACGCCGA TGAAGACCCT CTACATCTCG ACCTTCAACG GCAAGGACTG GGACATCTCC
GACAAGCCGG TCACCGAATA A
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| Protein sequence | MNLRSTSVFT SAGAFAAVLL AATSVAAAEK KYDPGASDTE IKIGQTVPHS GPGSLYGVLG
RVGEAYFQML NEKGGINGRK VKFLTLDDSY SSPKAVEATR RLVEQEEVLA LYGSLGTAPQ
TAVHKYLNSK KVPQLLLNTG ASKWNDPKNF KWTMAGLPLY PTEARILAKH VVSVKPDAKI
AILYQNDDFG RDFLGPFKKV LEEAGGRAKV VAEASYDLTE PTIDSQMINL SKSGADVFYN
ITTGKATSQS IRKVAELGWK PLQLLSAGST GRSILNAAGI ENATGIVAIR YSKEVGVPRF
ENDPDVKAFE EFRQKYLPNV DKDNTIAYAG YGQVVTMAEI LRRCGDNLTR ENVLKQATSL
KGFHSPYFLD GIEYSYTSDD YTPMKTLYIS TFNGKDWDIS DKPVTE
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