Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0795 |
Symbol | |
ID | 4021269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 892551 |
End bp | 893915 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637960985 |
Product | putative outer membrane protein |
Protein accession | YP_567934 |
Protein GI | 91975275 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.755835 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGC TTCTCGTCGG CGCCGCGCTC GTTGGCTCAG CCGTCAGCGC CCAGGCAGCC GATCTTGCCG TCAGAGCGCC GTACGTCAAG GCGCCGGTCG CGGCGATCTA TGACTGGACC GGATTCTACA TCGGCGGAAA CGTCGGCGTC GGCGTCGGTC GCAACCTGCA GAGCCACGTC TTCCCCGCCG GCGGCGTCGC CAACTCCTCC TATCTCCAGC CCCAGGGCGT GATCGGCGGC GGCCAGATCG GTTACAACTG GCAGACCAAT TCGGTGTTCG GCCCGCTGCT GATCGGCGTC GAGGCCGACA TCCAGGGCAG CGGCATGAGC GACGGCCGCA CCACCCTGAA CACGCTGAAC GGCGTGCTGG GCACGGTGAA CTACAATCAG AAGCTCGACT GGTTCACCAC GGTGCGCGGC CGCATCGGCA TCGCGCGCGG CCCGGTGGTC AGCTACTTCA CCGGCGGCTT CGCGGCGGGC GACGTCAAGA CCACCGTCAC CGAAGTCGGC CTGGTCCCGT TCAACCTCAG CGGCACCCGC ACCGGCTGGG TGATCGGCTC CGGCGTCGAA GCGGCGCTCG GCGGCAACTG GACCGGCAAG ATCGAATATC TGTATCTCGA CCTCGGCAAC CGGACCGACG TGTTCGGCAC CCAGTCGCTG CGCACCGAAT TGCGCGAGAA CATCTTCCGC GTCGGTCTGA ACTATCGCAT CGGCGGCACC GGCGCGTACA TCGCCCCGCC GCCGGCGAAC TGGGCCGGCC TGTATATCGG CGGCAATTTC GGTGGCTCGG CCACCGCGCG CAACCGCACC ACCGCGACCA TCGGCGGATT CACCGAGCAG TTCAACCTGT CGCCGGAAGG GTTCATCGGC GGCGGCCAGA TCGGCTACAA TTGGCAGGCT GCGAACTGGG TGTTCGGCGC CGAAGCCGAC TTCCAGGGCT CGACCCAGAA GGACGATCGC ACCGCGGTGT TCGGCTCGAC TGTGGCCTAC AATCAGAAGC TGCCCTGGTT CGGCACGGCG CGCGCCCGGC TCGGCTATTC GGTCGGCTCG ACGCTGCTCT ACGCCACCGG CGGTTACGCC TATGGCAACG TCAAGACCAA CATCGTGACC CCGCTCAGCA ACGAGACCTC CAATCGCTCG CGCAGCGGCT ATGCGGTCGG CGGCGGCGTT GAAATGCCGT TCAGCCTGTT CGGTCTGCTC GGCCCGAACT GGACCTCGAA GACCGAATAT CTCTACGTCG ACCTCGGCTC GACCACCGAC GTGTTCGCCG GCGGCCTCGG CGTGAGCACC TCCAAGGTGA CCGAGCACAT GGTCCGGACC GGCATCAACT ATCACTTCAA CCAACCGGTG GTCGCGAAGT ACTAA
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Protein sequence | MKKLLVGAAL VGSAVSAQAA DLAVRAPYVK APVAAIYDWT GFYIGGNVGV GVGRNLQSHV FPAGGVANSS YLQPQGVIGG GQIGYNWQTN SVFGPLLIGV EADIQGSGMS DGRTTLNTLN GVLGTVNYNQ KLDWFTTVRG RIGIARGPVV SYFTGGFAAG DVKTTVTEVG LVPFNLSGTR TGWVIGSGVE AALGGNWTGK IEYLYLDLGN RTDVFGTQSL RTELRENIFR VGLNYRIGGT GAYIAPPPAN WAGLYIGGNF GGSATARNRT TATIGGFTEQ FNLSPEGFIG GGQIGYNWQA ANWVFGAEAD FQGSTQKDDR TAVFGSTVAY NQKLPWFGTA RARLGYSVGS TLLYATGGYA YGNVKTNIVT PLSNETSNRS RSGYAVGGGV EMPFSLFGLL GPNWTSKTEY LYVDLGSTTD VFAGGLGVST SKVTEHMVRT GINYHFNQPV VAKY
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