| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0771 |
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| Symbol | |
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| ID | 4021245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 864476 |
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| End bp | 865318 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637960961 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_567910 |
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| Protein GI | 91975251 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACGGC TGAATGGCAA GGTTGCGGTG ATTACCGGTG CGACCAGCGG CATCGGTTTG
CGGACGGCCG AAGTGTTCGT CGCCGAGGGC GCCAGCATCG TCATCGCCGG GCGCCGCGCG
CCGGAGGGTG AAGCCCTCGC CGAGAAGCTT GGATCCTCCT GCGTCTTCAG ACAGACCGAC
GTCACCCAGG AAGAACAGAT CAAGGCTCTG ATCGCGCAGG CGATCGACTC GTTCGGCCGG
ATCGACTGCC TGTTCAACAA TGCCGGCGGG CCGGCCCAGA CCGGTGGCAT CGAGGGACTC
GAGGTCGAGC GGTTCGACGC TGCGATGGCC ACGCTGGTCC GCAGCGTCAT GCTCGGGATG
AAGCATGCCG CGCCGCATAT GAAGAAGCAG GGCTCCGGCT CGATCATTAA CAACGGCAGC
ATCGCCGGCC GGCTCGCAGG GTTCTCGTCG TCGGTGGTGT ACGGCGCCGC CAAGGCCGCG
GTGATCCACC TCACCCGCTG CGTCGCGATG GAGCTCGGAG AGTCCGGCGT CCGCGTCAAC
AGCATATCGC CCGGCGCGAT CGCGACCGGG ATCTTCGGCA AGGCGCTCGG CCTTACCGTC
GAAGCCGCGG AAAAAACCTC GGCGACGATG CGCGAGATTT ACAAGACCGC GCAGCCGATC
CAGCGGGCGG GGTTGCCGGA GGACATCGCT CAGGCCGCGG TATTCCTCGC CAGCGACGAG
TCCGGCTTCA TCAACGGCCA CGACCTCGTA ATCGACGGCG GCATTACCGG CGGCCGCAAC
TGGACGCAGC AGCAGCAGGG CTACGTCGCG CTCCGCAAGG CGTTCGACCA TGGCGAAGGC
TGA
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| Protein sequence | MGRLNGKVAV ITGATSGIGL RTAEVFVAEG ASIVIAGRRA PEGEALAEKL GSSCVFRQTD
VTQEEQIKAL IAQAIDSFGR IDCLFNNAGG PAQTGGIEGL EVERFDAAMA TLVRSVMLGM
KHAAPHMKKQ GSGSIINNGS IAGRLAGFSS SVVYGAAKAA VIHLTRCVAM ELGESGVRVN
SISPGAIATG IFGKALGLTV EAAEKTSATM REIYKTAQPI QRAGLPEDIA QAAVFLASDE
SGFINGHDLV IDGGITGGRN WTQQQQGYVA LRKAFDHGEG
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