Gene RPD_0757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0757 
Symbol 
ID4021230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp848493 
End bp849173 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content53% 
IMG OID637960946 
Productglycosyl transferase family protein 
Protein accessionYP_567896 
Protein GI91975237 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.861392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGTG AAGCGACATG GGTGGTTGTC CCCGCCTTCA ATGAGGGCGA GGTGATCGGC 
GAGACCATTA GGTCAGTTTT GAAGCAGTTC CCTAACGTCG TGGTGGTCGA TGATTGCTCC
TCGGACAACA CGCGATCGAT AGCGCTTGCG GCGGGAGCCC ATGTTTGCAG TCACCCAGTC
AATTTGGGTC AAGGGGCTGC CTTGGCAACG GGTATACGTT ACGCCCGCCT TCACGATGCG
CAGGCGATAG TTACGTTTGA TGCCGACGGG CAACATGACA TTAACGACGC CCAAGGCATG
TTGAAACTGC TCGTACCAGG GCAATGTGAG GTTGTTCTGG GATCCCGCTT TCTCGGAACG
GCCAAGAATA TAAGTGCGAG GAAGCGGCTG TTCTTAAAAC TCGCTACATT TTACACGCGG
CTGACGACTG GATTGGCAGT CACTGATACC CACAATGGGC TCAGGGCCTT TAGCGCGGTC
GCCGCAGACA GTATCCGCAT CCGGCAGAAC CGAATGGCAC ATGCTTCGGA GATATTGGAC
GAGATTTCGC GGTTAGGCCT ACCGTATAAA GAGACGGCCT GTACAATCAC ATATACTGAA
TATTCTGTCT CGAAAGGCCA AAGAATGTCT GGAGCATTCG CAATTCTTGC TGATCTAGCC
CTAAGAAAAT TCTACAAATG A
 
Protein sequence
MEREATWVVV PAFNEGEVIG ETIRSVLKQF PNVVVVDDCS SDNTRSIALA AGAHVCSHPV 
NLGQGAALAT GIRYARLHDA QAIVTFDADG QHDINDAQGM LKLLVPGQCE VVLGSRFLGT
AKNISARKRL FLKLATFYTR LTTGLAVTDT HNGLRAFSAV AADSIRIRQN RMAHASEILD
EISRLGLPYK ETACTITYTE YSVSKGQRMS GAFAILADLA LRKFYK