Gene RPD_0734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0734 
Symbol 
ID4021207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp824266 
End bp825723 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content64% 
IMG OID637960923 
Product4Fe-4S ferredoxin, iron-sulfur binding 
Protein accessionYP_567873 
Protein GI91975214 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02745] cytochrome c oxidase accessory protein FixG 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGC CTTTGCGCGA GTCCGATCTG CTGCCGGACG ATGACGGCCC GCTTTACGCT 
GCCGGTAAGA AGATCTATCC CCAAAGCGTC TCGGGATCGT TCCGCCGGAT CAAGTGGATC
CTGATGGTCG TCTGCCTCGG GATCTACTAC TTCCTGCCCT TCGTGCGCTG GAACCGTGGT
CTCGGCGCTC CCGACCAGGC GGTGCTGATC GACCTCGCCA ACAACCGGTT CTATTTTTTC
TTCATCGAGT TGTGGCCGCA GGAAATCTAT TACTTCACCG GGCTGCTGAT CGTCGCGGCG
ATCACCCTGT TCTTGATGAA CTCCCTCGGC GGCCGGGTGT GGTGCGGCTA TCTCTGTCCG
CAGACGGTGT GGACCGACCT GTTCTTCGCG GTCGAACGGC TGATCGAGGG CGACCGCCGC
GAGCGGATTC GCAAGGCGGA GGAGGGCTGG TCGCTGCAGC GCGGCGCCGA GCTGGTGCTG
AAGCATTCGA TCTGGTTGAT GATCGCGTGG TGGACCGGCG GCGCCTGGGT GCTGTATTTC
GCCGACGCGC CGACACTGAT CAAGGAGCTG GTCACCTTCC AGGCGCCGAT GGTCGCCTAT
ATCTGGATCG GTATCCTCAC CTTCACCACC TATACGCTCG CCGGCTTCAT GCGCGAGCAG
GTCTGCGTCT ACATGTGCCC ATGGCCGCGG ATCCAGGCGG CGCTGACCGA CGAATGGGCG
CTCAACGTCA CCTATAAATA CGATCGCGGC GAAACCCGCA TGTCGCTGAA GAAGGCCGCG
CAAGCGCGCG CGTTGGGCGA GCAGGTCGGC GATTGCGTCG ACTGCAACCA GTGCGTCGCG
GTGTGCCCGA CCGGCATCGA CATTCGCAAC GGGCCGCAGC TCGACTGCAT CCAGTGCGGG
CTGTGCATCG ACGCCTGCGA CAACGTCATG ACCAAGATCG GCCGGCCGAC CCGTCTGATC
GGCTATGATA ACGACATCAA CATCCATCGC CGGATGGAGG GCAAGCCCGA GGTCTTCAAG
CCGCTGCGCG CCCGAACTGT GGTGTATTCG GGGCTGATCG CCTCGATCGG CGCCATCATG
CTGTATACCC TGCTGAACCG CAGCCTGCTC GACCTCAACG TGCTGCACGA TCGCAACCCG
GTCGCGGTGC GGCTCAGCGA CGGCTCGATC CGCAACGGCT ACACCGTCCG CTTCCTCAAC
AAGCGCGGCT TCGACCGCGT CGTCGCGGTC GACGTCGTCG GCCCGCCGAA TGCGGTGATC
CACGTCGTCG GCACCGACTC GATCACGCCC GACCGGCCGA TGATCATCCT CGCCCGCGAC
ACCACCACCG AGCTGCGCGT GCTGGTGGAC TCCAACTCCA ATCAAGAGCT CGCCAAGTCC
ACGCCGGTGA CCTTCCACGT CACCGACATC GGCCTCGGCG AGGTCGCCAC CGCCAAGGAC
GTCTTCGTCA CGCCCTGA
 
Protein sequence
MNKPLRESDL LPDDDGPLYA AGKKIYPQSV SGSFRRIKWI LMVVCLGIYY FLPFVRWNRG 
LGAPDQAVLI DLANNRFYFF FIELWPQEIY YFTGLLIVAA ITLFLMNSLG GRVWCGYLCP
QTVWTDLFFA VERLIEGDRR ERIRKAEEGW SLQRGAELVL KHSIWLMIAW WTGGAWVLYF
ADAPTLIKEL VTFQAPMVAY IWIGILTFTT YTLAGFMREQ VCVYMCPWPR IQAALTDEWA
LNVTYKYDRG ETRMSLKKAA QARALGEQVG DCVDCNQCVA VCPTGIDIRN GPQLDCIQCG
LCIDACDNVM TKIGRPTRLI GYDNDINIHR RMEGKPEVFK PLRARTVVYS GLIASIGAIM
LYTLLNRSLL DLNVLHDRNP VAVRLSDGSI RNGYTVRFLN KRGFDRVVAV DVVGPPNAVI
HVVGTDSITP DRPMIILARD TTTELRVLVD SNSNQELAKS TPVTFHVTDI GLGEVATAKD
VFVTP