| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0729 |
|---|
| Symbol | |
|---|
| ID | 4021202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 819375 |
|---|
| End bp | 820295 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637960918 |
|---|
| Product | 2-dehydropantoate 2-reductase |
|---|
| Protein accession | YP_567868 |
|---|
| Protein GI | 91975209 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1893] Ketopantoate reductase |
|---|
| TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.691763 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGTTC TCGTGGTCGG CGCCGGCGCG ATCGGCGGCT ATTTCGGCGG CCGGCTGCTG
CAGGTCGGGC GTGACGTCAC CTTCCTGGTG CGGCCGAGGC GCGCCGAAGA ACTCGCGCGC
GACGGGCTCG TGATCAAAAG CCCGCACGGC GACCTCACGA TCCCGAATCC GCCGACCGTG
CAGGCCGCCG GGCTGAAGCC GGATTTCGAC CTTGTGCTGC TGAGCTGCAA GGCGTTCGAC
CTCGACGATG CGATCGCATC GTTCGCCGCC GGGGTCGGAC CGCAGACCGC GGTGCTGCCG
CTGCTCAACG GCCTGAGGCA TCTCGATGTG CTCGACGCGA CATTTGGTCG CGAGCGGGTG
CTCGGCGGAC AGTGCGTGAT CGCGGCGATG CTGAATGCGC AGCGCCATGT CGTGCAGCTC
GCGCCGATCA ATGCGATCAC TTTCGGCGAG CGCGACGGCA GCATGTCCGA GCGGGTCGGT
GCGATCGCGC GGACGCTCGG CGGCGCCGGT TTCGAGGTCA AGCCGACCGT CGAGATCATG
CAGGAAATGT GGGAGAAGTG GGTGTTCCTC GCCTCGCTTG CCGGCTCCAC CAGTCTGATG
CGCGCGCCGG TCGGCGACAT CCTGGCTGCG CCCGGCGGCG CCGATTTCAT GCTCGGGGTG
GTCGACGAAA TCTCCGCGGT CGCTGCCGAA GCCGGCTATC CGCCGCGCGA GGCGTTCCTG
GAGCGGACCC GCGGCATGTT ACTGGCCGAA GGCTCCAAAC TCACCGCCTC GATGTTTCGC
GACATCCTGG CCGGGGCGAA GATCGAGGCC GATCACATCA TCGGCGATCT GATCGCGCGC
GGCGACGCCG CCAAGCGTCC GGTCGCGCGG CTCCGGGTGA TCTACATCCA CCTCAAGGCC
TACGAGCGCC AACTCGGCTG A
|
|---|
| Protein sequence | MRVLVVGAGA IGGYFGGRLL QVGRDVTFLV RPRRAEELAR DGLVIKSPHG DLTIPNPPTV
QAAGLKPDFD LVLLSCKAFD LDDAIASFAA GVGPQTAVLP LLNGLRHLDV LDATFGRERV
LGGQCVIAAM LNAQRHVVQL APINAITFGE RDGSMSERVG AIARTLGGAG FEVKPTVEIM
QEMWEKWVFL ASLAGSTSLM RAPVGDILAA PGGADFMLGV VDEISAVAAE AGYPPREAFL
ERTRGMLLAE GSKLTASMFR DILAGAKIEA DHIIGDLIAR GDAAKRPVAR LRVIYIHLKA
YERQLG
|
|---|
| |