Gene RPD_0667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0667 
Symbol 
ID4021138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp752792 
End bp753238 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content63% 
IMG OID637960855 
Productphosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 
Protein accessionYP_567806 
Protein GI91975147 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTG CTGACTTTCT TTCGCCCGCG AATGTCCTGT TCGACCTGCG AGGCTCGGAT 
AAGAGCAAGC TGCTGGCGGA TTTGTCCGCA CGCGCCGCGG CCGGCGTCGA TCTGGCTCCC
ACGCAGGTCG CGCCCTATCT GATCAAGCGC GAAGAACTCG GATCGACCGG AATCGGCGAA
GGCGTGGCGA TCCCGCACAC AAGGCTGCCG GATCTGCGGC GCCCGTTTGG ACTTCTTGCG
AAACTGCGGA CGCCTGTCGA ATTCGATGCG ATCGATGCTC AGGCGGTCGA TATCGTGTTC
GTTCTGTTGT TGCCCGCGGT CGCCGACAAC GCGCATCTCG GTGAGATCGC GCTGGTGGCC
CGCACCTTCC GATCGGCGGA AACGCGCGAA CGCGTCCGCC GCGCAAAGGA TGCCTCACAG
CTCTATGCGG CGGTCAGCTG CGCGTAG
 
Protein sequence
MKIADFLSPA NVLFDLRGSD KSKLLADLSA RAAAGVDLAP TQVAPYLIKR EELGSTGIGE 
GVAIPHTRLP DLRRPFGLLA KLRTPVEFDA IDAQAVDIVF VLLLPAVADN AHLGEIALVA
RTFRSAETRE RVRRAKDASQ LYAAVSCA