Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0636 |
Symbol | cobN |
ID | 4021106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 721428 |
End bp | 725171 |
Gene Length | 3744 bp |
Protein Length | 1247 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637960824 |
Product | cobaltochelatase subunit CobN |
Protein accession | YP_567775 |
Protein GI | 91975116 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.411028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGGCT GCGCCGGAGT GCGCCGCATG CATCTGAAGC TCGACGCCAC CGCCAGCATC GATGACGGCG ACGTCGCGCG CGATCTGCAG CAGGCGCCGG CCGAGATCGT GGTGCTGTCG GCGGCGGACA CCGATCTCGC GGCCTTCGCC GCAGCGCGCG CGACGTTGCC GGACGACTTT CCAAGCCTGC GGCTGACCAA TCTGCTGGCG CTCGGCCATC CCGCCTCGGT CGATCTCTAT GTCGAGCGCA CGCTCGCCAA AGCCAGGATC GTGATCCTGC GGATGCTCGG CGGCGAGGCG TATTGGCCGC ACGGCGTCGA GAGCCTGCGC CGCGACGCGT TCGCGCGCGG CGCGCTGTTC GCCTGCATCC CCGGCGAGAT GCAGTGGAAC GCCGACCTCG CCGCGCGCGG CAATGTCGAT GCCGACGATG CGCATTCGCT GTGGCGCTAT TGCACCGAAG GCGGCGTCGA CAATCTGCAG CTCGCGCTGC GCTACGCCGC CTGGATGATC ATGCGCGGCG ACCCGCCGCC GCCGCCGCGG CCGATGCCCG CTGCGGGGTT CTGGCCGGAC GAGCCGCAAA AGTCGCAGCG CCGCCGCGCG CTGGTGATCT TCTATCGCGC GCTCGCCGCC AGCGGCGACA CCGCCGCGAT CGATGCGCTC CGCCTGGCGC TCGACGCCCG CGGCCTCGAC GCCGCCTGCC TCTACGTCAC AAGCCTGAAG GATGCGCGCT CGATCGCGTT CCTGCGCAGC GCGCTCGCCG CCGACCCGCC CGACATCATC GTCAACGCCA CCGCCTTCGC GACCGCGACC GCCACCGACG ATTCCGGCGT GCTGGCCTCG GCGGATTGCC CGGTCCTGCA GATCGCGCAG GCCGGAATCA GCCGCGACAG CTGGGAGCAA TCGTCCCGCG GCCTCAACCC GCGCGACCTC GCGATGCATG TCGTGCTGCC CGAGGTCGAC GGCCGGATCT TCGCCGGCGC GGTCGCGTTC AAGCAGCGCG GCACCGACGA GACCGACTAC GCGCCGACGA TCTATCAGCC GCTCGACGAC CGGATCGCTG CGGCCGCCGA TCTGGCGCAG GCCTGGGTGC GGCTGCGGCG GCTGCCGCGC GACCAGCGCC GCGTCGGCGT CGTGCTCGCC AACTATCCCA ATCGCGACGG CCGGCTCGGC AACGGCGTCG GCCTCGATAC CCCGCAATCG CTGCAGGATC TGCTCACCGC GCTGCGCGCC GAGGGCTACC TCACCGGCGA TCTGCCGGCC GACACCGCGG CGCTGATGCA AATCCTGCAG CGCGGTCCGA CCAATGCGCT GACCGGGCGC GATCTGCGCG ACGGCGGCGT GGCCTGGCCG GTCGCGGACT ACAACGGCGC CTTCGCGACG CTGCCGGATG CGGTGCGGTC CGCCGTCACG ACCCGCTGGG GCCAGCCGGA CGCCGATCCG CATGTCGCGG ACGGCTGCTT CCGGCTCGGC CTGCATCGCT TCGGCAACGT CCTGGTCGGC GTGCAGCCGG CGCGCGGTTA CAATATCGAT CCGAAATCCA GCTTCCACGA TCCGGACCTC GCGCCGCCGC ATCATTATCT GGCGTTCTAT CTGTGGCTCC GGCGCGAATT CGATGCGCAC GCGATCGTCC ATCTCGGCAA GCACGGCAAT CTCGAATGGC TGCCCGGCAA AAGCGCCGGG CTGTCGCGCG ACTGCTTCCC CGCCGCATTG CTCGGGCCGC TGCCGCATCT GTATCCGTTC ATCGTCAACG ATCCCGGCGA GGGCATCCAG GCCAAGCGCC GCAGCGCCGC GGTGATCATC GATCATCTGA CGCCGCCGAT GACCCGCGCC GAACTGCACG ACGAGATGGC GCGGCTGGAA GCGCTGGTCG ACGAATATGC GCTTGCGGCC GATCTCGATC CCAAACGCGC CGACGTGATC GCCGAAGACA TCCTGTCGCT GGCGCGCGCG ACCAGGCTCG ACGCCGACGT CGAGATCGAC CGCTCGACGC CGACGCTGGA CGCGCTGCGC GCGATCGACG CGCATCTGTG CGATCTCAAG GAGATGCAGA TCCGCGACGG GCTGCACGTC TTCGGCCGCA CGCCGCAGCC GTCGCAGCGC GACGATCTGC TGGTGTCGAT CGCCCGGCTG CCGCGCTCGG AGCTGAAGCC GCAGGACGCC TCGCTGCATC GCGCGCTGGC GCAGGACCTC GGCCTCGGTG AATTCGATCC GCTGACGCGC GATCTCGCCG CGGACTACAC CGGCCCGCGC CCGACTGTTC TGGCCGACCT CTGCGACCGC CCCTGGCGCA CCAGCGGCGA CACCGTCGAG CGCATCGAAT TACTTGCGTC TCGATTAGTC TCGACCCTTC ATCGCGCACG GCCTGACCCT CTCCCTTCAT GGCCTCACAC TTGGCCGGTG CTCGACTGGA TCGCGGCGTC GCTGCGTCCG GCGATCGACG CCTGCGGCGA CGCCGAGCGC AATGCGCTGC TGCGCGGGCT CGACGGGCAT TTCGTCCGCC CCGGACCGTC CGGCGCGCCG ACCCGCGGCC GGCCCGACGT GCTGCCGACC GGGCGCAATT TCTTCGCGGT CGATGTCCGC GCGGTGCCGA CGCCGTCGGC GTGGCGGATC GGGGCGCTCG CAGCCGAACG GCTGGTCGAG GCCTATTGGC AGGACGCCGG CGAATGGCCG CGCGCGATCG CGCTGTCGGC GTGGGGCACC GCGAATATGC GCACCGGAGG CGACGACGTC GCGCAGGCGC TGGCGCTGAT CGGCGCGCGC CCGACCTGGG AGGACGCCAC CGGCCGCGTC ACCGGCTTTG CGATCGTGCC GCTGTCGGAG CTGCAGCGGC CGCGCGTCGA TGTCACCTTC CGCGTCTCCG GCCTGTTCCG CGACGCCTTC CCGGTTCAAA TGGATCTGAT CGCGAGCGCG ATCGCGGCGA TCGCCGCCCT CGACGAACCC GACGACGCCA ATCCGATCGC AGCCCATGTC CGCACCCGCA CCGACCATCT GATCCAGACC GGCGTCGCGC CGGACGCCGC GCAGCGGCAG GCGGGCCTTC GGGTGTTCGG CTCGAAACCC GGCGCCTATG GCGCCGGGCT GCAGGCCTTG ATCGACGAAG GCGGCTGGGA GACGCGCGGC GATCTCGCCG ACGCCTACCT CGCCTGGGGC GGCTACGCCT ATGGCGCCGG CCGCGACGGC GACGAGGCCC GCGACGCTTT TGCGGCGCGG CTGACAGCAA CGCAGCTGGT CGCGCAGTCG CAGGACAATC GCGAGCACGA CATTCTCGAC TCCGATGATT ACTACCAGTT CATCGGCGGC CTCGCCGCCA CCGTCGAGAC GCTGAGCGGC GCCGCGCCGA AGATCGCCCA TCTCGACACC TCGCGCCCCG AGGCGCCGCT GCCGCGGACG CTGGCGCACG AGATCGGCCG CGTGGTGCGC GGCCGCGCCG CCAATCCGAA ATGGATCGCC GGCGTGATGC GCCACGGCTA CAAGGGCGCG GTCGAGATCG CCGCGACGGT CGACTATCTG TTCGGCTTCG CCGCCTCGAC CGACGCGGTC GGCAGCCATC ATTTCGATCA GCTGTTCGCC GCCTATCTGG ACGACGAGCA GGTCCGCGAC TTCCTGCGCG ACGCCAATCC GGCGGCGATG CGCGAAACCG CCGAGCGCTT CGCCGAAGCG ATCCGGCGTG GGCTGTGGAC GCCGCGCTCC AACCACGCCG CCGATCTGCT CGCCGAACTC CTCACCCGGA AGGAAACCGC ATGA
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Protein sequence | MRGCAGVRRM HLKLDATASI DDGDVARDLQ QAPAEIVVLS AADTDLAAFA AARATLPDDF PSLRLTNLLA LGHPASVDLY VERTLAKARI VILRMLGGEA YWPHGVESLR RDAFARGALF ACIPGEMQWN ADLAARGNVD ADDAHSLWRY CTEGGVDNLQ LALRYAAWMI MRGDPPPPPR PMPAAGFWPD EPQKSQRRRA LVIFYRALAA SGDTAAIDAL RLALDARGLD AACLYVTSLK DARSIAFLRS ALAADPPDII VNATAFATAT ATDDSGVLAS ADCPVLQIAQ AGISRDSWEQ SSRGLNPRDL AMHVVLPEVD GRIFAGAVAF KQRGTDETDY APTIYQPLDD RIAAAADLAQ AWVRLRRLPR DQRRVGVVLA NYPNRDGRLG NGVGLDTPQS LQDLLTALRA EGYLTGDLPA DTAALMQILQ RGPTNALTGR DLRDGGVAWP VADYNGAFAT LPDAVRSAVT TRWGQPDADP HVADGCFRLG LHRFGNVLVG VQPARGYNID PKSSFHDPDL APPHHYLAFY LWLRREFDAH AIVHLGKHGN LEWLPGKSAG LSRDCFPAAL LGPLPHLYPF IVNDPGEGIQ AKRRSAAVII DHLTPPMTRA ELHDEMARLE ALVDEYALAA DLDPKRADVI AEDILSLARA TRLDADVEID RSTPTLDALR AIDAHLCDLK EMQIRDGLHV FGRTPQPSQR DDLLVSIARL PRSELKPQDA SLHRALAQDL GLGEFDPLTR DLAADYTGPR PTVLADLCDR PWRTSGDTVE RIELLASRLV STLHRARPDP LPSWPHTWPV LDWIAASLRP AIDACGDAER NALLRGLDGH FVRPGPSGAP TRGRPDVLPT GRNFFAVDVR AVPTPSAWRI GALAAERLVE AYWQDAGEWP RAIALSAWGT ANMRTGGDDV AQALALIGAR PTWEDATGRV TGFAIVPLSE LQRPRVDVTF RVSGLFRDAF PVQMDLIASA IAAIAALDEP DDANPIAAHV RTRTDHLIQT GVAPDAAQRQ AGLRVFGSKP GAYGAGLQAL IDEGGWETRG DLADAYLAWG GYAYGAGRDG DEARDAFAAR LTATQLVAQS QDNREHDILD SDDYYQFIGG LAATVETLSG AAPKIAHLDT SRPEAPLPRT LAHEIGRVVR GRAANPKWIA GVMRHGYKGA VEIAATVDYL FGFAASTDAV GSHHFDQLFA AYLDDEQVRD FLRDANPAAM RETAERFAEA IRRGLWTPRS NHAADLLAEL LTRKETA
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