Gene RPD_0569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0569 
Symbol 
ID4021037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp643190 
End bp643822 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content62% 
IMG OID637960756 
ProductIojap-related protein 
Protein accessionYP_567708 
Protein GI91975049 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCAAGG CGGATTTGCC GAAGTCGGTC GCGGAGGAGA TAGTCCCCGC GAAGACAGTC 
AAGGCGAAGA CCGCCAAAGC GAAGACTGCC ACGTCGAAGA CCGCTGCTTC GAAGACTGCT
GCCTCTAAGA CTGCTGCTGC ATCGAAGACT GCTGCTGCAT CGAAGACCTC TGCCTCGAAG
ACCCCTGCCT CGAAGACCCC TGCCTCGAAG ACCGCTGCCT CGAAGACCGC GGCCTCGCGA
TCTGCCAAGG CCGAGGCGAC GCCTCCTGAT GCGATCTCCA CGACGCATGG GACCGCCGAG
GAAACGCTGC AGCTGATCCT CTCCCGCCTC GACGACATGA AGGCGGAAGA AACAGTGGCG
ATCGATCTCC GCGGCAAATC GGCGATGTTC GACTACGTGG TCGTCACCAG CGGGCGGGTC
AACCGCCACG TCGGCGCGAT CTCGGAGAAC GTCTCGAAAG CGCTGAAAGA GGCCGGCATC
TCCAAGATCC ATGTCGAGGG CCTGACCAAT TGCGATTGGG TCCTGATGGA TTGCGGCGAC
GTGGTGCTGC ATGTGTTCAG GCCGGAGGTT CGCGAGTTCT ACAACATCGA GCGGTTGTGG
ACCCAGGGAC CTCAGCCGGC GAAGACGCTG TAG
 
Protein sequence
MSKADLPKSV AEEIVPAKTV KAKTAKAKTA TSKTAASKTA ASKTAAASKT AAASKTSASK 
TPASKTPASK TAASKTAASR SAKAEATPPD AISTTHGTAE ETLQLILSRL DDMKAEETVA
IDLRGKSAMF DYVVVTSGRV NRHVGAISEN VSKALKEAGI SKIHVEGLTN CDWVLMDCGD
VVLHVFRPEV REFYNIERLW TQGPQPAKTL