| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0442 |
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| Symbol | |
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| ID | 4020908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 509393 |
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| End bp | 510451 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637960627 |
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| Product | exodeoxyribonuclease III |
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| Protein accession | YP_567581 |
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| Protein GI | 91974922 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0708] Exonuclease III |
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| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.576927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGATG CGCGGGTCAA GCCCGCGCAT GACGCCGTGC TGGATCGCAC CGACGGTCGC
GTAGGCCGTC TCTATCAAGA CCGTCATGCC GGGCTTGACC CGGCAATCCA TCCCCTTCGT
AAGACGCCAC AGCAAGCACC TGGCTGGTTG TACACATCAG CGGCTTGCGT TCGATCGCGT
GCCGCGCAAC AAACAGCGCG TTCTTCGCAA AGACGGCGTC CCGCCCGCAA CTCGCCCCGG
CTTCCCATGC GCTTCACCCT CACGACATGG AACATCAACT CGGTCCGGCT GCGCATCGAT
CTGGTCGCGG CGTTCCTGAA AGAGCAGCAG CCCGACGTGC TGTGCCTGCA GGAGACCAAG
TGTCCCGACG ACGCGTTTCC GCTGAAGCGC TTCAAGCAGC TCGGCTACGA GCACATCGCG
CTGAACGGAC AGAAGGGCTA TCACGGCGTC GCGGTGATCT CGAAGATTCC GTTCGTCGCG
CGCGACATCC GCATTTTCTG CGACAACCTC GACTCGCGCC ACATCTCGGT GTCGCTCGGC
ACCGGCGACA ACGATCCGCC GCTGGTGCTG CATAATTTCT ACGTGCCTGC CGGCGGCGAC
GTTGCCGATC CCGAACTCAA TCCGAAGTTC AAGCACAAGC TGTCGTTTCT CGACGAGATG
AAGGCCTGCG AGCCGCTGCA TCCCTCCGGC GACGCGCGGC ATATTCTGGT CGGCGACCTC
AACGTCGCGC CGCACGAGCA CGACGTCTGG TCGCACAAGC AGTTACTTAA AGTCGTGTCG
CACACGCCGG TGGAATGCGA GAAGCTGCTC GCCGTGCTGC GCGCCGGCAA TTGGGTCGAC
GTCGCGCGCG ACCGGATTCC GCTGTCGGAG AAGATCTACA CCTGGTGGAG CTATCGCGCC
GCCGACTGGA CCGTCGGCGA TCGCGGCCGA CGGCTCGATC ACATCTGGGT CTCCGAAGCG
CTGCGCACCC GCGTCACAGA CTTCAAGATC CTGCGCGACG CGCGAAGCTG GGAACGCCCG
AGCGACCACG TCCCGGTGAC GGTGACGATG GAGCTGTAA
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| Protein sequence | MMDARVKPAH DAVLDRTDGR VGRLYQDRHA GLDPAIHPLR KTPQQAPGWL YTSAACVRSR
AAQQTARSSQ RRRPARNSPR LPMRFTLTTW NINSVRLRID LVAAFLKEQQ PDVLCLQETK
CPDDAFPLKR FKQLGYEHIA LNGQKGYHGV AVISKIPFVA RDIRIFCDNL DSRHISVSLG
TGDNDPPLVL HNFYVPAGGD VADPELNPKF KHKLSFLDEM KACEPLHPSG DARHILVGDL
NVAPHEHDVW SHKQLLKVVS HTPVECEKLL AVLRAGNWVD VARDRIPLSE KIYTWWSYRA
ADWTVGDRGR RLDHIWVSEA LRTRVTDFKI LRDARSWERP SDHVPVTVTM EL
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