Gene RPD_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0439 
Symbol 
ID4020905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp507145 
End bp507714 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content69% 
IMG OID637960624 
Producthypothetical protein 
Protein accessionYP_567578 
Protein GI91974919 
COG category[S] Function unknown 
COG ID[COG3786] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATAA CATTCAGATC AGAGCGTTAC AAGAACCCGA CGGTGGACCG GCCATTGTCG 
ATGCTGCAGG TTCGCGCCGC GGCAGGTCAG CGCAGCCGCG GCTGGCTGAC CGCCGGAGGG
ATGACGATCC CGGTCGCGCT CGGCCGCGGC GGCATCCTCG CCAACAAGCG CGAGGGCGAC
GGCGGCACGC CGCGCGGGAC ATTCCGGCCG CGGCGGTTGT GGTGGCGGGC CGACCGCTGG
CCGAAGCCGC GAACATTCCT GCCGGTTCGG CCGATCACCG CCGAGGACGC CTGGTGCGAG
GACCCTTCGA GCCGGCATTA CAACCGTCCG CTGCGCCGCG GCCCCGGCGA GGCCGGCGAT
CGGCTGCAGC GTGCCGATCA CCTGTATGAT TTCATCATCG AGATCGACCA CAACACAACG
CCGCGGATCG CCGGCCGCGG CAGCGCCGTA TTCCTGCATC TGGCGCGCGA CAATTTCGGC
CCGACCGCCG GTTGCGTCGC CATGACCCGT GGCAACCTGC TGCGGCTGTT GGCCAGGATC
GGGCCGAACA CCAAGATCGT GATCGGGTAG
 
Protein sequence
MKITFRSERY KNPTVDRPLS MLQVRAAAGQ RSRGWLTAGG MTIPVALGRG GILANKREGD 
GGTPRGTFRP RRLWWRADRW PKPRTFLPVR PITAEDAWCE DPSSRHYNRP LRRGPGEAGD
RLQRADHLYD FIIEIDHNTT PRIAGRGSAV FLHLARDNFG PTAGCVAMTR GNLLRLLARI
GPNTKIVIG